RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 FRMD1Q8N878 549 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 MCOLN3Q8TDD5 553 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 ZNF75CPQ92670 426 aaPredicted RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 PTERQ96BW5 349 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 ATOH8Q96SQ7 321 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 UNKQ9C0B0 810 aaKnown RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 NSRP1Q9H0G5 558 aaKnown RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 EBF2Q9HAK2 575 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 PARVBQ9HBI1 364 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 NUDT4Q9NZJ9 180 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 SUFUQ9UMX1 484 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 OARD1Q9Y530 152 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 TECTAO75443 2155 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 NPEPPSL1A6NEC2 478 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 IFRD1O00458 451 aaPredicted RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 CATP04040 527 aaKnown RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 SERPINE1P05121 402 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 THEGLP0DJG4 465 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 CD38P28907 300 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 ALDH3A1P30838 453 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 AP1S2P56377 157 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 CHI3L2Q15782 390 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 CFAP157Q5JU67 520 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 METRNLQ641Q3 311 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 TTC23LQ6PF05 361 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 CYHR1Q6ZMK1 362 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 CHST15Q7LFX5 561 aaPredicted RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 C11orf96Q7Z7L8 435 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 KIRREL3Q8IZU9 778 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 TCAIMQ8N3R3 496 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 DTWD2Q8NBA8 298 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 ASB11Q8WXH4 323 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 OR2M4Q96R27 311 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 SLC12A9Q9BXP2 914 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 CARS2Q9HA77 564 aaKnown RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 CYP4F12Q9HCS2 524 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 CDYLQ9Y232 598 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 GPSM3Q9Y4H4 160 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 TNPO3Q9Y5L0 923 aaKnown RBP13.41□□□□□ -0.26
VAPB-202ENST00000395802 DGKBQ9Y6T7 804 aa13.41□□□□□ -0.26
VAPB-202ENST00000395802 MUC3AQ02505 3323 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 PLXND1Q9Y4D7 1925 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 TMEM114B3SHH9 223 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 SUPT3HB4E1H0 165 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 H0Y8X5 98 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 CDC7O00311 574 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 SUPT3HO75486 399 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 MATN4O95460 622 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 TNFP01375 233 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 IDSP22304 550 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 GNPDA1P46926 289 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 HNMTP50135 292 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 CDKL1Q00532 357 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 CSTF1Q05048 431 aaKnown RBP13.4□□□□□ -0.26
VAPB-202ENST00000395802 STX3Q13277 289 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 TGFBIQ15582 683 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 OR4D1Q15615 310 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 METTL2BQ6P1Q9 378 aaKnown RBP13.4□□□□□ -0.26
VAPB-202ENST00000395802 UBE2R2Q712K3 238 aaPredicted RBP13.4□□□□□ -0.26
VAPB-202ENST00000395802 PIGWQ7Z7B1 504 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 HOMEZQ8IX15 550 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 RGL4Q8IZJ4 473 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 FBXO39Q8N4B4 442 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 FBXL6Q8N531 539 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 PPP4R1Q8TF05 950 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 DNASE2BQ8WZ79 361 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 HSPA12BQ96MM6 686 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 MECRQ9BV79 373 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 THAP1Q9NVV9 213 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 TRNAU1APQ9NX07 287 aaKnown RBP13.4□□□□□ -0.26
VAPB-202ENST00000395802 CD274Q9NZQ7 290 aa13.4□□□□□ -0.26
VAPB-202ENST00000395802 EIF2B4Q9UI10 523 aaKnown RBP13.4□□□□□ -0.26
VAPB-202ENST00000395802 SPTY2D1-AS1A0A0U1RR47 76 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 PRR5-ARHGAP8B1AHC4 643 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 STX16-NPEPL1H3BU86 382 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 GFYI3L273 518 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 STX16O14662 325 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 FFAR2O15552 330 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 DLX3O60479 287 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 ANXA5P08758 320 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 SBK3P0C264 359 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 SLC35G4P0C7Q5 338 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 BGNP21810 368 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 RPIAP49247 311 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 FNTBP49356 437 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 ALDH18A1P54886 795 aaKnown RBP13.39□□□□□ -0.27
VAPB-202ENST00000395802 SRP54P61011 504 aaKnown RBP13.39□□□□□ -0.27
VAPB-202ENST00000395802 PLA2G4EQ3MJ16 856 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 ZNF658BQ4V348 819 aaPredicted RBP13.39□□□□□ -0.27
VAPB-202ENST00000395802 GKAP1Q5VSY0 366 aaPredicted RBP13.39□□□□□ -0.27
VAPB-202ENST00000395802 SBSNQ6UWP8 590 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 UNC5DQ6UXZ4 953 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 NAPRTQ6XQN6 538 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 PARGQ86W56 976 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 OR13H1Q8NG92 308 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 GAB3Q8WWW8 586 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 ATL1Q8WXF7 558 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 TRMOQ9BU70 441 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 PITPNM3Q9BZ71 974 aa13.39□□□□□ -0.27
VAPB-202ENST00000395802 EML4Q9HC35 981 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms