RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 COG4Q9H9E3 785 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 HOMER3Q9NSC5 361 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 RARRES3Q9UL19 164 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 ZKSCAN5Q9Y2L8 839 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 ATRXP46100 2492 aa13.41□□□□□ -0.26
CXCL12-205ENST00000395794 MGAQ8IWI9 3026 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 CCDC162PA2VCL2 907 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 TLCD2A6NGC4 264 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 AP3B1O00203 1094 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 MATN2O00339 956 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 FTH1P02794 183 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 MT-ND3P03897 115 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 FGF5P12034 268 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 WT1P19544 449 aaPredicted RBP13.4□□□□□ -0.26
CXCL12-205ENST00000395794 CD151P48509 253 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 HSD11B2P80365 405 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 TUBB3Q13509 450 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 SEMA5AQ13591 1074 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 ITIH4Q14624 930 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 DBN1Q16643 649 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 TBR1Q16650 682 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.4□□□□□ -0.26
CXCL12-205ENST00000395794 TMTC4Q5T4D3 741 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 BORAQ6PGQ7 559 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 TIPARPQ7Z3E1 657 aaKnown RBP13.4□□□□□ -0.26
CXCL12-205ENST00000395794 CARFQ8N187 725 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 PPHLN1Q8NEY8 458 aaKnown RBP13.4□□□□□ -0.26
CXCL12-205ENST00000395794 OR4E2Q8NGC2 313 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 OR6P1Q8NGX9 317 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 LCN9Q8WX39 176 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 SLC45A3Q96JT2 553 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 SLC41A2Q96JW4 573 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 CATSPER2Q96P56 530 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 RANBP9Q96S59 729 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 SPRY4Q9C004 299 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 SRMSQ9H3Y6 488 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 MVB12BQ9H7P6 319 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 LNPEPQ9UIQ6 1025 aa13.4□□□□□ -0.26
CXCL12-205ENST00000395794 DRG1Q9Y295 367 aaKnown RBP13.4□□□□□ -0.26
CXCL12-205ENST00000395794 SMG1Q96Q15 3661 aaKnown RBP13.4□□□□□ -0.27
CXCL12-205ENST00000395794 IGHV5-51A0A0C4DH38 117 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 LIN7AO14910 233 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-205ENST00000395794 CEP104O60308 925 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 KIAA0754O94854 1291 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 ZBTB11O95625 1053 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-205ENST00000395794 DLGAP3O95886 979 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 FGGP02679 453 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 OR56A5P0C7T3 313 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 PRSS56P0CW18 603 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 ETS1P14921 441 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 PSMA3P25788 255 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 STAT5AP42229 794 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 PPP1CAP62136 330 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 PRAMEP78395 509 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 SYTL3Q4VX76 610 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 TSTD2Q5T7W7 516 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 DRICH1Q6PGQ1 229 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-205ENST00000395794 AFTPHQ6ULP2 937 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 CERS6Q6ZMG9 384 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 PIANPQ8IYJ0 282 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 UNC5BQ8IZJ1 945 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 LILRA3Q8N6C8 439 aaPredicted RBP13.39□□□□□ -0.27
CXCL12-205ENST00000395794 GALNT6Q8NCL4 622 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 HDAC10Q969S8 669 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 MAP3K3Q99759 626 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 TSSK1BQ9BXA7 367 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 SLC12A9Q9BXP2 914 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 SOHLH2Q9NX45 425 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 SEMA5BQ9P283 1151 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 ANAPC5Q9UJX4 755 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 RIMKLBQ9ULI2 386 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 PCDHB3Q9Y5E6 796 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 RPS6KL1Q9Y6S9 549 aa13.39□□□□□ -0.27
CXCL12-205ENST00000395794 LOC101059948A0A1B0GTJ6 334 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 GSAPA4D1B5 854 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 OR51F1A6NGY5 319 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 KALRNO60229 2985 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 SPAG6O75602 509 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 FAM87AP0C7U9 286 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 FOLR1P15328 257 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 POLR2CP19387 275 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 CDH3P22223 829 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 RPL22P35268 128 aaKnown RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 DLSTP36957 453 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 CCR10P46092 362 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 PREPP48147 710 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 BASP1P80723 227 aaKnown RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 PLOD1Q02809 727 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 KCNAB1Q14722 419 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 LINC00303Q3SY05 128 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 FASTKD1Q53R41 847 aaKnown RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 AARS2Q5JTZ9 985 aaKnown RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 PACS1Q6VY07 963 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 PRUNE1Q86TP1 453 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 HOOK3Q86VS8 718 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 OR4L1Q8NH43 312 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 ELMO1Q92556 727 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 TFGQ92734 400 aaPredicted RBP13.38□□□□□ -0.27
CXCL12-205ENST00000395794 PEX13Q92968 403 aa13.38□□□□□ -0.27
CXCL12-205ENST00000395794 FCRL4Q96PJ5 515 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms