RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 CLHC1Q8NHS4 586 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 ITFG1Q8TB96 612 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 FOXJ1Q92949 421 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 CLP1Q92989 425 aaKnown RBP17.57■□□□□ 0.4
SREBF1-204ENST00000395756 ULK4Q96C45 1275 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 LRRC58Q96CX6 371 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 LMLNQ96KR4 655 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 RAD9AQ99638 391 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 TMEM181Q9P2C4 612 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 PCDHGB4Q9UN71 923 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 POLR3HQ9Y535 204 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-204ENST00000395756 PCDHGB5Q9Y5G0 923 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 FAM149AA5PLN7 773 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 LOC730098B7Z3J9 87 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 TIPRLO75663 272 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 MTHFD1P11586 935 aaKnown RBP17.57■□□□□ 0.4
SREBF1-204ENST00000395756 ZNF24P17028 368 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 NSG1P42857 185 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 RPIAP49247 311 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 CRY1Q16526 586 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 BLOC1S3Q6QNY0 202 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 MIPOL1Q8TD10 442 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 STON2Q8WXE9 905 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 EME1Q96AY2 570 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 HTATIP2Q9BUP3 242 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 TMEM106CQ9BVX2 250 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 VCX3BQ9H321 246 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 INTS7Q9NVH2 962 aaKnown RBP17.57■□□□□ 0.4
SREBF1-204ENST00000395756 SUN2Q9UH99 717 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 ITM2BQ9Y287 266 aa17.57■□□□□ 0.4
SREBF1-204ENST00000395756 PFDN1O60925 122 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 LYNP07948 512 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 CEBPBP17676 345 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 XPAP23025 273 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 NEK2P51955 445 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 RPL38P63173 70 aaKnown RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 FPGSQ05932 587 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 GK3PQ14409 553 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 PTGR1Q14914 329 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 RARS2Q5T160 578 aaKnown RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 FBXO46Q6PJ61 603 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 HSD11B1LQ7Z5J1 315 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 RALGPS2Q86X27 583 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 PHC3Q8NDX5 983 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 CANT1Q8WVQ1 401 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 PPP2R3CQ969Q6 453 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 ZNF382Q96SR6 550 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 RIC8BQ9NVN3 520 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 CMTM6Q9NX76 183 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 TMPRSS11EQ9UL52 423 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 MRPS23Q9Y3D9 190 aaKnown RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 EN2P19622 333 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 POLR2JP52435 117 aaKnown RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 C6orf10Q5SRN2 563 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 FBXL19Q6PCT2 694 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 TMEM79Q9BSE2 394 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 ATG10Q9H0Y0 220 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 ANTXRLA6NF34 631 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 INPP4BO15327 924 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 STAMBPO95630 424 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 MT-ND1P03886 318 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 CSNK1DP48730 415 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 SPINT3P49223 89 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 METAP1P53582 386 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 ADGRE1Q14246 886 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 TMEM240Q5SV17 173 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 C6orf52Q5T4I8 152 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 GATA6Q92908 595 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 CNBD2Q96M20 576 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 PPM1MQ96MI6 270 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 AIG1Q9NVV5 245 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 ZDHHC3Q9NYG2 299 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 C6orf203Q9P0P8 240 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 CD300AQ9UGN4 299 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 RIMS3Q9UJD0 308 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 MAFFQ9ULX9 164 aa17.56■□□□□ 0.4
SREBF1-204ENST00000395756 TNPO3Q9Y5L0 923 aaKnown RBP17.56■□□□□ 0.4
SREBF1-204ENST00000395756 AKAP10O43572 662 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 UQCRBP14927 111 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 ATP6V1B2P21281 511 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 SLC6A2P23975 617 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 ERVK-8P63133 956 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 SFSWAPQ12872 951 aaKnown RBP17.55■□□□□ 0.4
SREBF1-204ENST00000395756 CAMK1Q14012 370 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 GPR33Q49SQ1 333 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 CACUL1Q86Y37 369 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 PROKR1Q8TCW9 393 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 RHBDF1Q96CC6 855 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 WRAP53Q9BUR4 548 aaKnown RBP17.55■□□□□ 0.4
SREBF1-204ENST00000395756 PTBP2Q9UKA9 531 aaKnown RBP17.55■□□□□ 0.4
SREBF1-204ENST00000395756 ERVW-1Q9UQF0 538 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 TRBV5-4A0A0C4DH59 114 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 MAGEA13PA6NCF6 341 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 ASPDHA6ND91 283 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 FXYD1O00168 92 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 PLK4O00444 970 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 SH3BGRLO75368 114 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 RSL1D1O76021 490 aaKnown RBP17.55■□□□□ 0.4
SREBF1-204ENST00000395756 OTCP00480 354 aa17.55■□□□□ 0.4
SREBF1-204ENST00000395756 HLA-EP13747 358 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms