RNA–Protein interactions for RNA: ENST00000394987.4

C15orf39-202, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-202ENST00000394987 KCTD13Q8WZ19 329 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 UBE2E3Q969T4 207 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 IGSF21Q96ID5 467 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 MTERF1Q99551 399 aaKnown RBP13.41□□□□□ -0.26
C15orf39-202ENST00000394987 REEP1Q9H902 201 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 MAP10Q9P2G4 905 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 KIAA1551Q9HCM1 1747 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 ZBTB42B2RXF5 422 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 DNAJA2O60884 412 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 GNRH1P01148 92 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 CHRM5P08912 532 aaPredicted RBP13.41□□□□□ -0.26
C15orf39-202ENST00000394987 CYBAP13498 195 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 TLX1P31314 330 aaPredicted RBP13.41□□□□□ -0.26
C15orf39-202ENST00000394987 ENTPD1P49961 510 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 LBX1P52954 281 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 PDZK1Q5T2W1 519 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 KIAA0408Q6ZU52 694 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 RBM12BQ8IXT5 1001 aaKnown RBP13.41□□□□□ -0.26
C15orf39-202ENST00000394987 PRSS58Q8IYP2 241 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 RP9Q8TA86 221 aaKnown RBP13.41□□□□□ -0.26
C15orf39-202ENST00000394987 TADA1Q96BN2 335 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 ZHX1-C8orf76Q96EF9 292 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 QRFPRQ96P65 431 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 CDK15Q96Q40 435 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 RAB23Q9ULC3 237 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 TBC1D30Q9Y2I9 924 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 OR10H1Q9Y4A9 318 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 PCDHB1Q9Y5F3 818 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 INSL5Q9Y5Q6 135 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 SLC7A4O43246 635 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 CLDN7O95471 211 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 GNPDA1P46926 289 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 TOMM20Q15388 145 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 RTP2Q5QGT7 225 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 TXNDC11Q6PKC3 985 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 RPS27LQ71UM5 84 aaKnown RBP13.41□□□□□ -0.26
C15orf39-202ENST00000394987 PIM3Q86V86 326 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 RDH11Q8TC12 318 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 UTP4Q969X6 686 aaKnown RBP13.41□□□□□ -0.26
C15orf39-202ENST00000394987 TIFAQ96CG3 184 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 MIPEPQ99797 713 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 OSBPL2Q9H1P3 480 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 SUV39H2Q9H5I1 410 aa13.41□□□□□ -0.26
C15orf39-202ENST00000394987 RFPL2O75678 378 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 TSPAN9O75954 239 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 ACTR3P61158 418 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 ELP6Q0PNE2 266 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 EIF2B5Q13144 721 aaKnown RBP13.4□□□□□ -0.26
C15orf39-202ENST00000394987 GPAT3Q53EU6 434 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 BROXQ5VW32 411 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 LYPLAL1Q5VWZ2 237 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 MSANTD2Q6P1R3 559 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 ZNF540Q8NDQ6 660 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 C19orf18Q8NEA5 215 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 FAR1Q8WVX9 515 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 ACDQ96AP0 544 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 PPP1R14BQ96C90 147 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 TRMOQ9BU70 441 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 PRRG3Q9BZD7 231 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 HDHD2Q9H0R4 259 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 DNAJC11Q9NVH1 559 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 STMN3Q9NZ72 180 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 PTTG2Q9NZH5 202 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 LYVE1Q9Y5Y7 322 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 SMCHD1A6NHR9 2005 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 RBM47A0AV96 593 aaKnown RBP13.4□□□□□ -0.26
C15orf39-202ENST00000394987 PROZP22891 400 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 AKR1D1P51857 326 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 MARCH8Q5T0T0 291 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 IFNLR1Q8IU57 520 aaPredicted RBP13.4□□□□□ -0.26
C15orf39-202ENST00000394987 ENKURQ8TC29 256 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 DLG3Q92796 817 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 SLC39A3Q9BRY0 314 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 OSBPL11Q9BXB4 747 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 VIPP01282 170 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 NCK1P16333 377 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 IDSP22304 550 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 HTR7P34969 479 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 SIRPB2Q5JXA9 342 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 RBM20Q5T481 1227 aaKnown RBP13.4□□□□□ -0.26
C15orf39-202ENST00000394987 PRR23BQ6ZRT6 265 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 CDK20Q8IZL9 346 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 HDDC3Q8N4P3 179 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 EBPLQ9BY08 206 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 SMOC2Q9H3U7 446 aa13.4□□□□□ -0.26
C15orf39-202ENST00000394987 TUBA8Q9NY65 449 aaPredicted RBP13.4□□□□□ -0.26
C15orf39-202ENST00000394987 FAM25AB3EWG3 89 aa13.4□□□□□ -0.27
C15orf39-202ENST00000394987 FAM25CB3EWG5 89 aa13.4□□□□□ -0.27
C15orf39-202ENST00000394987 FAM25GB3EWG6 89 aa13.4□□□□□ -0.27
C15orf39-202ENST00000394987 CCNKO75909 580 aa13.4□□□□□ -0.27
C15orf39-202ENST00000394987 ENO2P09104 434 aaPredicted RBP13.4□□□□□ -0.27
C15orf39-202ENST00000394987 XRCC1P18887 633 aaPredicted RBP13.4□□□□□ -0.27
C15orf39-202ENST00000394987 MANFP55145 182 aaKnown RBP13.4□□□□□ -0.27
C15orf39-202ENST00000394987 ILF2Q12905 390 aaKnown RBP13.4□□□□□ -0.27
C15orf39-202ENST00000394987 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.4□□□□□ -0.27
C15orf39-202ENST00000394987 TAF8Q7Z7C8 310 aa13.4□□□□□ -0.27
C15orf39-202ENST00000394987 IGDCC3Q8IVU1 814 aa13.4□□□□□ -0.27
C15orf39-202ENST00000394987 HMGB4Q8WW32 186 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms