RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 ZFP90Q8TF47 636 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 MED8Q96G25 268 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 NUAK2Q9H093 628 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 MAGEE1Q9HCI5 957 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 BRCA1P38398 1863 aaKnown RBP13.02□□□□□ -0.33
NFKB1-202ENST00000394820 ATN1P54259 1190 aaPredicted RBP13.02□□□□□ -0.33
NFKB1-202ENST00000394820 FKBP1BP68106 108 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 SELPLGQ14242 412 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 HERC3Q15034 1050 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 DSG4Q86SJ6 1040 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 ARHGAP12Q8IWW6 846 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 ADHFE1Q8IWW8 467 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 ZYG11BQ9C0D3 744 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 ABCB9Q9NP78 766 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 IGSF5Q9NSI5 407 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 ARL15Q9NXU5 204 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 NINQ8N4C6 2090 aa13.02□□□□□ -0.33
NFKB1-202ENST00000394820 M0R129 80 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 GPIP06744 558 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 HIST1H2AGP0C0S8 130 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 HIST1H2ADP20671 130 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 PLA2G16P53816 162 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 TRAP1Q12931 704 aaKnown RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 SPCS2Q15005 226 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 KIAA0930Q6ICG6 404 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ANKRD26P1Q6NSI1 321 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 MBOAT1Q6ZNC8 495 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 P2RY8Q86VZ1 359 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 CARM1Q86X55 608 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ABHD11Q8NFV4 315 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 MAGED4Q96JG8 741 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 HIST1H2AHQ96KK5 128 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 SERPINB11Q96P15 392 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 FCRL5Q96RD9 977 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 RANBP9Q96S59 729 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 SLC30A3Q99726 388 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 HIST1H2AJQ99878 128 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 H2AFJQ9BTM1 129 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 GSTO2Q9H4Y5 243 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 NSUN3Q9H649 340 aaKnown RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ASB8Q9H765 288 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 OPTCQ9UBM4 332 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 UTS2RQ9UKP6 389 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF232Q9UNY5 417 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 A0A0D9SEW6 157 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 CCNKO75909 580 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 MZF1P28698 734 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 KCNQ1P51787 676 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 SEMA3BQ13214 749 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 PIK3R6Q5UE93 754 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 SULT1C3Q6IMI6 304 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 LIX1Q8N485 282 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 FAM86B1Q8N7N1 296 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ANKRD60Q9BZ19 345 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 CCSER2Q9H7U1 834 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF490Q9ULM2 529 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 TESMINQ9Y4I5 508 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 PCDHGA8Q9Y5G5 932 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 KRBA1A5PL33 1030 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 AQP12BA6NM10 295 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 GLUD1P00367 558 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 RHOCP08134 193 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 RFC2P35250 354 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 RGS4P49798 205 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 RHOAP61586 193 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 VARS2Q5ST30 1063 aaKnown RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 AQP12AQ8IXF9 295 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 RBM12BQ8IXT5 1001 aaKnown RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ADGRG5Q8IZF4 528 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 C2CD4AQ8NCU7 369 aaPredicted RBP13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ROPN1LQ96C74 230 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 C14orf119Q9NWQ9 140 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 TPRKBQ9Y3C4 175 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 PCDHB5Q9Y5E4 795 aa13.01□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 A0A1W2PP18 115 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 ELOVL7A1L3X0 281 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 DNTTP04053 509 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CD36P16671 472 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 PRIM2P49643 509 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 ZNF177Q13360 481 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 TCEA2Q15560 299 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CRY1Q16526 586 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CYP20A1Q6UW02 462 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 PRSS55Q6UWB4 352 aaPredicted RBP13□□□□□ -0.33
NFKB1-202ENST00000394820 SYVN1Q86TM6 617 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 NDNFQ8TB73 568 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 RAB2BQ8WUD1 216 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 NCSTNQ92542 709 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 UBE2FQ969M7 185 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 IGSF8Q969P0 613 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 PANX1Q96RD7 426 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 CGREF1Q99674 301 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 SH3GL1Q99961 368 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 SLC25A51Q9H1U9 297 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 KRT84Q9NSB2 600 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 GIN1Q9NXP7 522 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 USE1Q9NZ43 259 aa13□□□□□ -0.33
NFKB1-202ENST00000394820 UNC80Q8N2C7 3258 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms