RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 TSNQ15631 228 aaKnown RBP6.84□□□□□ -1.31
RTN4-205ENST00000394609 ARL13AQ5H913 290 aaPredicted RBP6.84□□□□□ -1.31
RTN4-205ENST00000394609 VWA5B1Q5TIE3 1220 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 FBXL19Q6PCT2 694 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 MMAAQ8IVH4 418 aaKnown RBP6.84□□□□□ -1.31
RTN4-205ENST00000394609 CPNE9Q8IYJ1 553 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 CHPFQ8IZ52 775 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 RBFAQ8N0V3 343 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 NXPE1Q8N323 547 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 CBARPQ8N350 705 aaPredicted RBP6.84□□□□□ -1.31
RTN4-205ENST00000394609 ZNF781Q8N8C0 355 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 SMRP1Q8NCR6 262 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 LKAAEAR1Q8TD35 194 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 CD200R1Q8TD46 325 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 EEF1AKMT1Q8WVE0 214 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 OR8D1Q8WZ84 308 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 SUSD6Q92537 303 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 KCNJ9Q92806 393 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 LRIG1Q96JA1 1093 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 TTC1Q99614 292 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 FAM83DQ9H4H8 585 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 STN1Q9H668 368 aaKnown RBP6.84□□□□□ -1.31
RTN4-205ENST00000394609 POPDC3Q9HBV1 291 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 SYTL2Q9HCH5 934 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 THEGQ9P2T0 379 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 DKK3Q9UBP4 350 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 HEY2Q9UBP5 337 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 TRMT6Q9UJA5 497 aaKnown RBP6.84□□□□□ -1.31
RTN4-205ENST00000394609 OAS3Q9Y6K5 1087 aaKnown RBP6.84□□□□□ -1.31
RTN4-205ENST00000394609 F5P12259 2224 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 ANKRD36A6QL64 1941 aa6.84□□□□□ -1.31
RTN4-205ENST00000394609 TRBV5-4A0A0C4DH59 114 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 A0A1W2PNR3 127 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 TSPAN11A1L157 253 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 NPEPPSL1A6NEC2 478 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 A8MT66 165 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CAPN14A8MX76 684 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 UBXN8O00124 270 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CDK2AP1O14519 115 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 IPO13O94829 963 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 SLC25A14O95258 325 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 TSPAN12O95859 305 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 APODP05090 189 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 FAM157BP0CG42 384 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CYP2A6P11509 494 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 HNRNPLP14866 589 aaKnown RBP eCLIP6.83□□□□□ -1.325e-9■■■□□ 16.4
RTN4-205ENST00000394609 ATP5F1P24539 256 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 MPSTP25325 297 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 SERPINB3P29508 390 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PGM1P36871 562 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PPARGP37231 505 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 PSMD8P48556 350 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CLCN7P51798 805 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PRKAA2P54646 552 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 ADARP55265 1226 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 IL2P60568 153 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 ZBTB16Q05516 673 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 TNP2Q05952 138 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 ILF2Q12905 390 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 RALGDSQ12967 914 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 MED21Q13503 144 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 ACOX1Q15067 660 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CCDC85BQ15834 202 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 PFKFB4Q16877 469 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 AAK1Q2M2I8 961 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 GPR33Q49SQ1 333 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 FBXO48Q5FWF7 155 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CFAP157Q5JU67 520 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 ERAP2Q6P179 960 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 TXNDC11Q6PKC3 985 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 DET1Q7L5Y6 550 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PIWIL2Q8TC59 973 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 ARRDC3Q96B67 414 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 LINGO1Q96FE5 620 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PPP1R36Q96LQ0 422 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 EBF4Q9BQW3 602 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 RIOK2Q9BVS4 552 aaKnown RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 DRC3Q9H069 523 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PRSS16Q9NQE7 514 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 ARL8BQ9NVJ2 186 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PKD2L2Q9NZM6 624 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 NCKIPSDQ9NZQ3 722 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 THAP10Q9P2Z0 257 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 MBD1Q9UIS9 605 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 TMPRSS11EQ9UL52 423 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PADI4Q9UM07 663 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 COQ6Q9Y2Z9 468 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 PCDHB1Q9Y5F3 818 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 DOCK8Q8NF50 2099 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 LRRC14BA6NHZ5 514 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 NCF1BA6NI72 391 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 AGAP14A8MT82 685 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 NCF1CA8MVU1 366 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 TMEM114B3SHH9 223 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 BTN3A1O00481 513 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 NEMP1O14524 444 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 CASQ2O14958 399 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 ELFN1P0C7U0 828 aa6.83□□□□□ -1.32
RTN4-205ENST00000394609 NCF1P14598 390 aaPredicted RBP6.83□□□□□ -1.32
RTN4-205ENST00000394609 UQCRBP14927 111 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms