RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 PDLIM1O00151 329 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 EML2O95834 649 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 LATS1O95835 1130 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 SEMG1P04279 462 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 NELFEP18615 380 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 USP39Q53GS9 565 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 VITQ6UXI7 678 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 LCA5Q86VQ0 697 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 AMER3Q8N944 861 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 PPFIBP2Q8ND30 876 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 BHLHE22Q8NFJ8 381 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 OR10Q1Q8NGQ4 319 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 CANT1Q8WVQ1 401 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 TMA16Q96EY4 203 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 SPHK2Q9NRA0 654 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 EGFL7Q9UHF1 273 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 ZNF639Q9UID6 485 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 LRFN2Q9ULH4 789 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 ZNF490Q9ULM2 529 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 EXPH5Q8NEV8 1989 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 VILLO15195 856 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 ZNF235Q14590 738 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 FAM180BQ6P0A1 224 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 DHDDSQ86SQ9 333 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 ZNF740Q8NDX6 193 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 WDR20Q8TBZ3 569 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 HERVK_113Q902F9 699 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 IRF7Q92985 503 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 RILPQ96NA2 401 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 ECSITQ9BQ95 431 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 INPP5KQ9BT40 448 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 MRPL17Q9NRX2 175 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 MARK1Q9P0L2 795 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 HEPACAM2A8MVW5 462 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 PRRG1O14668 218 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 UGT2B4P06133 528 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 ELAVL2Q12926 359 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 SHHQ15465 462 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 LAYNQ6UX15 382 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 GPSM1Q86YR5 675 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 DTWD1Q8N5C7 304 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 TP53I13Q8NBR0 393 aaPredicted RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 GTF2H4Q92759 462 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 TMIGD2Q96BF3 282 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 COQ10AQ96MF6 247 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 RHNO1Q9BSD3 238 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 TRIM39Q9HCM9 518 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 SORCS3Q9UPU3 1222 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 RP1P56715 2156 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 H0Y626 953 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 FFAR2O15552 330 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 ACPPP15309 386 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 RPS3P23396 243 aaKnown RBP eCLIP8.27□□□□□ -1.095e-28■■■□□ 15.7
GAPVD1-204ENST00000394083 EPHA2P29317 976 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 SOX11P35716 441 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 SOX9P48436 509 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 SLC11A2P49281 568 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 UGP2Q16851 508 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 IZUMO2Q6UXV1 221 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 TRIM46Q7Z4K8 759 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 PDZD8Q8NEN9 1154 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 TANKQ92844 425 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 APIPQ96GX9 242 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 TUBB6Q9BUF5 446 aa8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 RPL26L1Q9UNX3 145 aaKnown RBP8.27□□□□□ -1.09
GAPVD1-204ENST00000394083 LRBAP50851 2863 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 ARHGEF33A8MVX0 844 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 CAPN1P07384 714 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 ELF1P32519 619 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 PREPP48147 710 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 CYP2R1Q6VVX0 501 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 PDZD4Q76G19 769 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 CDYL2Q8N8U2 506 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 TTC16Q8NEE8 873 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 RP9Q8TA86 221 aaKnown RBP8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 FAM131CQ96AQ9 280 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 TTC1Q99614 292 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 SIKE1Q9BRV8 207 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 TRIM62Q9BVG3 475 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 ABCG4Q9H172 646 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 ZFYVE1Q9HBF4 777 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 HEBP1Q9NRV9 189 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 DFNA5O60443 496 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 SLC25A14O95258 325 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 MYL4P12829 197 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 LCP2Q13094 533 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 ZNF177Q13360 481 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 APOFQ13790 326 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 ENPP2Q13822 863 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 C6orf52Q5T4I8 152 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 TANGO2Q6ICL3 276 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 ZNF852Q6ZMS4 543 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 RYBPQ8N488 228 aaPredicted RBP8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 MIEF2Q96C03 454 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 RMDN1Q96DB5 314 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 SEMA6AQ9H2E6 1030 aa8.26□□□□□ -1.09
GAPVD1-204ENST00000394083 TDP1Q9NUW8 608 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms