RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 HIF1AQ16665 826 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 ADGRG6Q86SQ4 1221 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 PLXDC1Q8IUK5 500 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 RELL1Q8IUW5 271 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 PDIK1LQ8N165 341 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 TAB3Q8N5C8 712 aaPredicted RBP18.28■□□□□ 0.52
SNCB-202ENST00000393693 GPR26Q8NDV2 337 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 MCUQ8NE86 351 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 ELMO2Q96JJ3 720 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 TGM7Q96PF1 710 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 SPATA16Q9BXB7 569 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 TXLNGYQ9BZA5 131 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 ULBP3Q9BZM4 244 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 EIF2B3Q9NR50 452 aaKnown RBP18.28■□□□□ 0.52
SNCB-202ENST00000393693 ZNF624Q9P2J8 865 aaPredicted RBP18.28■□□□□ 0.52
SNCB-202ENST00000393693 RSPH14Q9UHP6 348 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 TP53TG5Q9Y2B4 290 aa18.28■□□□□ 0.52
SNCB-202ENST00000393693 RGSL1A5PLK6 1076 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 PRR19A6NJB7 356 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 SASH3O75995 380 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 SLC25A14O95258 325 aaPredicted RBP18.27■□□□□ 0.52
SNCB-202ENST00000393693 PIRTP0C851 137 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 XRCC1P18887 633 aaPredicted RBP18.27■□□□□ 0.52
SNCB-202ENST00000393693 DLSTP36957 453 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 HSD17B3P37058 310 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 SLC19A1P41440 591 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 LEPRP48357 1165 aaKnown RBP18.27■□□□□ 0.52
SNCB-202ENST00000393693 CLCNKAP51800 687 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 MAP7Q14244 749 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 SEPT7Q16181 437 aaKnown RBP18.27■□□□□ 0.52
SNCB-202ENST00000393693 LACTB2Q53H82 288 aaPredicted RBP18.27■□□□□ 0.52
SNCB-202ENST00000393693 C6orf15Q6UXA7 325 aaPredicted RBP18.27■□□□□ 0.52
SNCB-202ENST00000393693 LRIG3Q6UXM1 1119 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 TMEM26Q6ZUK4 368 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 CNTD1Q8N815 330 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 GALNT6Q8NCL4 622 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 TEKT5Q96M29 485 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 TTC25Q96NG3 672 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 EPB41L1Q9H4G0 881 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 TRIM39Q9HCM9 518 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 CROTQ9UKG9 612 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 DNAJC16Q9Y2G8 782 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 KCNMB2Q9Y691 235 aa18.27■□□□□ 0.52
SNCB-202ENST00000393693 SPENQ96T58 3664 aaKnown RBP18.27■□□□□ 0.52
SNCB-202ENST00000393693 CLEC18AA5D8T8 446 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 ERI2A8K979 691 aaKnown RBP18.26■□□□□ 0.51
SNCB-202ENST00000393693 KIF1CO43896 1103 aaKnown RBP18.26■□□□□ 0.51
SNCB-202ENST00000393693 MTX2O75431 263 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 UBXN7O94888 489 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 METTL18O95568 372 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 VIPP01282 170 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 SLC4A1P02730 911 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 APRTP07741 180 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 AMD1P17707 334 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 EIF3BP55884 814 aaKnown RBP18.26■□□□□ 0.51
SNCB-202ENST00000393693 ZBTB17Q13105 803 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 SEPT6Q14141 434 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 ERV3-1Q14264 604 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 CRTC2Q53ET0 693 aaPredicted RBP18.26■□□□□ 0.51
SNCB-202ENST00000393693 HSP90B2PQ58FF3 399 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 ANKRD22Q5VYY1 191 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 CLEC18BQ6UXF7 455 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 CROCCP2Q86T23 111 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 TMEM135Q86UB9 458 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 GOLGA6L1Q8N7Z2 621 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 CLEC18CQ8NCF0 446 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 OR6C1Q96RD1 312 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 CEP41Q9BYV8 373 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 GBA3Q9H227 469 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 ZFYVE1Q9HBF4 777 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 XAB2Q9HCS7 855 aaKnown RBP18.26■□□□□ 0.51
SNCB-202ENST00000393693 SAYSD1Q9NPB0 183 aa18.26■□□□□ 0.51
SNCB-202ENST00000393693 GOLGA8MH3BSY2 632 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 KATNA1O75449 491 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 KIAA0754O94854 1291 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 MAGEA4P43358 317 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 PDIA2Q13087 525 aaKnown RBP18.25■□□□□ 0.51
SNCB-202ENST00000393693 INSCQ1MX18 579 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 DNAJC21Q5F1R6 531 aaKnown RBP18.25■□□□□ 0.51
SNCB-202ENST00000393693 TRIM48Q8IWZ4 208 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 IQCKQ8N0W5 287 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 RSC1A1Q92681 617 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 AGAP3Q96P47 875 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 TRIB3Q96RU7 358 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 ADGRE3Q9BY15 652 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 CDC42EP4Q9H3Q1 356 aaKnown RBP18.25■□□□□ 0.51
SNCB-202ENST00000393693 UCK1Q9HA47 277 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 AAR2Q9Y312 384 aaKnown RBP18.25■□□□□ 0.51
SNCB-202ENST00000393693 KCTD3Q9Y597 815 aa18.25■□□□□ 0.51
SNCB-202ENST00000393693 PDZK1P1A8MUH7 402 aa18.24■□□□□ 0.51
SNCB-202ENST00000393693 AP3B1O00203 1094 aa18.24■□□□□ 0.51
SNCB-202ENST00000393693 CHUKO15111 745 aa18.24■□□□□ 0.51
SNCB-202ENST00000393693 ANXA9O76027 345 aa18.24■□□□□ 0.51
SNCB-202ENST00000393693 TMEM63AO94886 807 aa18.24■□□□□ 0.51
SNCB-202ENST00000393693 MLNP12872 115 aa18.24■□□□□ 0.51
SNCB-202ENST00000393693 BRAFP15056 766 aa18.24■□□□□ 0.51
SNCB-202ENST00000393693 ZNF7P17097 686 aaPredicted RBP18.24■□□□□ 0.51
SNCB-202ENST00000393693 RPL10P27635 214 aaKnown RBP18.24■□□□□ 0.51
SNCB-202ENST00000393693 PSMB4P28070 264 aa18.24■□□□□ 0.51
SNCB-202ENST00000393693 IFFO1Q0D2I5 559 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 705 ms