RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 SH3BP2P78314 561 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 SARNPP82979 210 aaKnown RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 CDK16Q00536 496 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 DHX9Q08211 1270 aaKnown RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 PRKG2Q13237 762 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 EIF3IQ13347 325 aaKnown RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 SQSTM1Q13501 440 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 DHX34Q14147 1143 aaKnown RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 KRT33BQ14525 404 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 TGIF1Q15583 401 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 ANKRD20A4Q4UJ75 823 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 SYTL3Q4VX76 610 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 CTSL3PQ5NE16 218 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 ANKS6Q68DC2 871 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 FBXO38Q6PIJ6 1188 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 WDR74Q6RFH5 385 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 CERS6Q6ZMG9 384 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZFAND4Q86XD8 727 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 IGDCC3Q8IVU1 814 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 SPACA3Q8IXA5 215 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 PPIL6Q8IXY8 311 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 LSMEM2Q8N112 164 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 LMNTD1Q8N9Z9 388 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 MCUQ8NE86 351 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR5AR1Q8NGP9 310 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 KCNE4Q8WWG9 221 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 ART4Q93070 314 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 GRAMD1AQ96CP6 724 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 C16orf45Q96MC5 204 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 PPM1MQ96MI6 270 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZNF578Q96N58 590 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 FERD3LQ96RJ6 166 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 P2RY12Q9H244 342 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 XKR8Q9H6D3 395 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 VPS37BQ9H9H4 285 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 UCK1Q9HA47 277 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 MRM3Q9HC36 420 aaKnown RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 XAB2Q9HCS7 855 aaKnown RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 APMAPQ9HDC9 416 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 KCND1Q9NSA2 647 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 SAMD15Q9P1V8 674 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 PCYOX1Q9UHG3 505 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 SLC24A2Q9UI40 661 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 ANAPC5Q9UJX4 755 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 PLAGL1Q9UM63 463 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 RUVBL2Q9Y230 463 aaKnown RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 RPS6KL1Q9Y6S9 549 aa7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 GOLGA4Q13439 2230 aaKnown RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 MN1Q10571 1320 aaPredicted RBP7.48□□□□□ -1.21
HMGB3P1-201ENST00000393368 A0A087WV48 116 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZCWPW2A0A1B0GU75 182 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 C17orf113A0A1B0GUU1 675 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 SLC5A10A0PJK1 596 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 KRT87PA6NCN2 255 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR6C74A6NCV1 312 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR5K3A6NET4 321 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 SDR42E2A6NKP2 422 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 BHMG1C9JSJ3 638 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 AP3B1O00203 1094 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 HGSO14964 777 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 KLK10O43240 276 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 NIPSNAP2O75323 286 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 NDUFS3O75489 264 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 FTH1P02794 183 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 MLNP12872 115 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 POLR2CP19387 275 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 FMO4P31512 558 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 CCR7P32248 378 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 PAFAH1B1P43034 410 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 TTPAP49638 278 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ERVPABLB-1P60509 514 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ETF1P62495 437 aaKnown RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 MPP1Q00013 466 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 HSPA14Q0VDF9 509 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 COL9A2Q14055 689 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 KCNAB1Q14722 419 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 CLPPQ16740 277 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 BBS9Q3SYG4 887 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 AARS2Q5JTZ9 985 aaKnown RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 LYPLAL1Q5VWZ2 237 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZNF470Q6ECI4 717 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 PTRHD1Q6GMV3 140 aaKnown RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 KIAA0930Q6ICG6 404 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 IGF2-ASQ6U949 168 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 CENPUQ71F23 418 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ARHGAP22Q7Z5H3 698 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 CLEC14AQ86T13 490 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 PDZD3Q86UT5 571 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 PLXDC1Q8IUK5 500 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 DENND6AQ8IWF6 608 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 RBM12BQ8IXT5 1001 aaKnown RBP7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 BMPERQ8N8U9 685 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 AVL9Q8NBF6 648 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 AGBL5Q8NDL9 886 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 ZNF248Q8NDW4 579 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR4E2Q8NGC2 313 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 OR52E1Q8NGJ3 308 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 CFAP61Q8NHU2 1237 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 LPGAT1Q92604 370 aa7.47□□□□□ -1.21
HMGB3P1-201ENST00000393368 SLCO2A1Q92959 643 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms