RNA–Protein interactions for RNA: ENST00000393164.6

ATP2B1-203, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2B1, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-203ENST00000393164 TUBB8Q3ZCM7 444 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 KHDC1Q4VXA5 237 aaKnown RBP3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 CDKL4Q5MAI5 379 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 ZNF648Q5T619 568 aaPredicted RBP3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 HHATQ5VTY9 493 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 ZNF549Q6P9A3 640 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 KLHL35Q6PF15 583 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 CMC1Q7Z7K0 106 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 SLC9B2Q86UD5 537 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 PDZD3Q86UT5 571 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 SLC22A9Q8IVM8 553 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 DCUN1D3Q8IWE4 304 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 CPNE9Q8IYJ1 553 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 KIRREL3Q8IZU9 778 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 KRT222Q8N1A0 295 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 SLC22A18ASQ8N1D0 253 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 PELI3Q8N2H9 469 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 TCAIMQ8N3R3 496 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 FAM46DQ8NEK8 389 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 OR6C4Q8NGE1 309 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 PPP1R14CQ8TAE6 165 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 RHEBL1Q8TAI7 183 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 GPBAR1Q8TDU6 330 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 LMX1AQ8TE12 382 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 DYDC1Q8WWB3 177 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 FAM136AQ96C01 138 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 PDXPQ96GD0 296 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 OLFM1Q99784 485 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 SH3GL2Q99962 352 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 SELENOSQ9BQE4 189 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 MRPL46Q9H2W6 279 aaKnown RBP3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 TRIT1Q9H3H1 467 aaKnown RBP3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 CAB39LQ9H9S4 337 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 EURLQ9NYK6 297 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 RNF112Q9ULX5 631 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 RUVBL2Q9Y230 463 aaKnown RBP3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 ASF1AQ9Y294 204 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 PRSS21Q9Y6M0 314 aa3.46□□□□□ -1.85
ATP2B1-203ENST00000393164 ATXN2Q99700 1313 aaKnown RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 SLC5A10A0PJK1 596 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 LMO7DNF2Z398 122 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 GOLGA8RI6L899 631 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 GIPC1O14908 333 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 PRPF4O43172 522 aaKnown RBP eCLIP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 KERAO60938 352 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 H2AFYO75367 372 aaKnown RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 GPC4O75487 556 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 RFPL1O75677 317 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 IPO13O94829 963 aaKnown RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 VIPP01282 170 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 ANXA5P08758 320 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 ZNF883P0CG24 379 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 TFEBP19484 476 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 HPDP32754 393 aaPredicted RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 HNMTP50135 292 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 DUSP3P51452 185 aaPredicted RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 SLC18A2Q05940 514 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 GRIK2Q13002 908 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 EIF2B5Q13144 721 aaKnown RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 NFE2L1Q14494 772 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 KIF19Q2TAC6 998 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 UBAP2Q5T6F2 1119 aaKnown RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 KCTD16Q68DU8 428 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 SLC30A9Q6PML9 568 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 ABRAXAS1Q6UWZ7 409 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 MICALCLQ6ZW33 695 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 UBE2R2Q712K3 238 aaPredicted RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 PIM3Q86V86 326 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 GPSM1Q86YR5 675 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 ZNF547Q8IVP9 402 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 CEP97Q8IW35 865 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 TBC1D21Q8IYX1 336 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 C4orf33Q8N1A6 199 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 FAM76AQ8TAV0 307 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 EEF1AKMT1Q8WVE0 214 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 TFGQ92734 400 aaPredicted RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 KIAA1191Q96A73 305 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 UBXN10Q96LJ8 280 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 CCDC138Q96M89 665 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 C12orf66Q96MD2 445 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 EGFL8Q99944 293 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 TMEM168Q9H0V1 697 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 ARRDC1-AS1Q9H2J1 176 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 GAREM1Q9H706 876 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 PARVBQ9HBI1 364 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 MRPL40Q9NQ50 206 aaKnown RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 POT1Q9NUX5 634 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 PCOLCE2Q9UKZ9 415 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 KCNK6Q9Y257 313 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 TNPO3Q9Y5L0 923 aaKnown RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 R4GN57 208 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 PLXNA2O75051 1894 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 EYSQ5T1H1 3165 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 SPTBN5Q9NRC6 3674 aaKnown RBP3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 A0A1B0GTQ1 180 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 HMX2A2RU54 273 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 SUPT3HB4E1H0 165 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 AGPSO00116 658 aa3.46□□□□□ -1.86
ATP2B1-203ENST00000393164 SUPT3HO75486 399 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms