RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PPP1R11O60927 126 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ALDH1A2O94788 518 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MT-ND2P03891 347 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 DNTTP04053 509 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CYP2C8P10632 490 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 IGFBP5P24593 272 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CA5AP35218 305 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 RFC2P35250 354 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 HCAR3P49019 387 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PRKCDQ05655 676 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CD47Q08722 323 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 TP53BP2Q13625 1128 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 VPS26BQ4G0F5 336 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 LRRC38Q5VT99 294 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 C9orf131Q5VYM1 1079 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ANKS6Q68DC2 871 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 GTF2IRD2BQ6EKJ0 949 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 TMEM81Q6P7N7 255 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 GTF2IRD2Q86UP8 949 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PROSER1Q86XN7 944 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MIB1Q86YT6 1006 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 IGDCC3Q8IVU1 814 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ADGRF2Q8IZF7 708 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PLD5Q8N7P1 536 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 WDSUB1Q8N9V3 476 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ASB15Q8WXK1 588 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 SHC3Q92529 594 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 HERPUD2Q9BSE4 406 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CRISPLD1Q9H336 500 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 RC3H2Q9HBD1 1191 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ZBTB20Q9HC78 741 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF334Q9HCZ1 680 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 JPH1Q9HDC5 661 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 SNTG1Q9NSN8 517 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MALT1Q9UDY8 824 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 NOD1Q9Y239 953 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PCM1Q15154 2024 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 C19orf81C9J6K1 198 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CYP11A1P05108 521 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 RETP07949 1114 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ANXA6P08133 673 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 RPS17P08708 135 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 S100PP25815 95 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ARL4AP40617 200 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MAP2K3P46734 347 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 UGT2B15P54855 530 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 RAB5BP61020 215 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 YWHAEP62258 255 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 FKBP1AP62942 108 aaKnown RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 EMX1Q04741 257 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 MXD1Q05195 221 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CYBRD1Q53TN4 286 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 FAM180BQ6P0A1 224 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF613Q6PF04 617 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 PID1Q7Z2X4 250 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 UNC5BQ8IZJ1 945 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 C12orf45Q8N5I9 185 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ST6GAL2Q96JF0 529 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 COQ10AQ96MF6 247 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 CNPPD1Q9BV87 410 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 GPR63Q9BZJ6 419 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 SMURF2Q9HAU4 748 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 ZNF112Q9UJU3 913 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 STRCQ7RTU9 1775 aa7.52□□□□□ -1.21
VTI1A-201ENST00000393077 NID2Q14112 1375 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 MEIS2O14770 477 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 SYN3O14994 580 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 C1QBP02746 253 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 ADORA3P0DMS8 318 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 SLC2A2P11168 524 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 HOXB1P14653 301 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 HDCP19113 662 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 NPR2P20594 1047 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 DNASE1P24855 282 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 CDH5P33151 784 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 STX4Q12846 297 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 PPP1R8Q12972 351 aaKnown RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 KLF1Q13351 362 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 ORC1Q13415 861 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 C1DQ13901 141 aaKnown RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 IL18Q14116 193 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 TATDN3Q17R31 274 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 GNASQ5JWF2 1037 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 SHQ1Q6PI26 577 aaKnown RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 NAPRTQ6XQN6 538 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 PIWIL4Q7Z3Z4 852 aaKnown RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 RETREG3Q86VR2 466 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 TXNDC5Q8NBS9 432 aaKnown RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 CNIH3Q8TBE1 160 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 NR4A3Q92570 626 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 CENPIQ92674 756 aaPredicted RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 Q96MT0 163 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 CBWD1Q9BRT8 395 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 MRM3Q9HC36 420 aaKnown RBP7.51□□□□□ -1.21
VTI1A-201ENST00000393077 GPRC5CQ9NQ84 441 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 KLHL21Q9UJP4 597 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 PCDHGB2Q9Y5G2 931 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 DISC1C4P0D8 188 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 H0YCG3 227 aa7.51□□□□□ -1.21
VTI1A-201ENST00000393077 CAPN5O15484 640 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms