RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 IL7RP16871 459 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 B3GALT5-AS1P59052 145 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 UFM1P61960 85 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 RPS18P62269 152 aaKnown RBP0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 FCHO2Q0JRZ9 810 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 BLMHQ13867 455 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 CCDC38Q502W7 563 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 ZNF805Q5CZA5 627 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 CXorf66Q5JRM2 361 aaPredicted RBP0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 SLC22A25Q6T423 547 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 GDPGP1Q6ZNW5 385 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 INTS8Q75QN2 995 aaKnown RBP0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 FTSJ3Q8IY81 847 aaKnown RBP0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 NIPA2Q8N8Q9 360 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 OR10G8Q8NGN5 311 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 VANGL1Q8TAA9 524 aaPredicted RBP0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 MRAPQ8TCY5 172 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 BADQ92934 168 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 HARBI1Q96MB7 349 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 REEP2Q9BRK0 252 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 TDRD1Q9BXT4 1180 aaKnown RBP0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 PITPNM3Q9BZ71 974 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 PIGMQ9H3S5 423 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 TUBB1Q9H4B7 451 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 MAGIXQ9H6Y5 334 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 KIF9Q9HAQ2 790 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 MYOZ2Q9NPC6 264 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 MIOSQ9NXC5 875 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 RCC2Q9P258 522 aaKnown RBP0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 TMEM184BQ9Y519 407 aaPredicted RBP0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 CLIC4Q9Y696 253 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 ARID1AO14497 2285 aa0.92□□□□□ -2.26
RNU6-239P-201ENST00000390990 A0A1W2PR80 420 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 TSPAN3O60637 253 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 ZNF217O75362 1048 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 PRKRAO75569 313 aaKnown RBP0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 POP4O95707 220 aaKnown RBP0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 ICAM1P05362 532 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 PROS1P07225 676 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 H1F0P07305 194 aaKnown RBP0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 CA4P22748 312 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 OXTRP30559 389 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 CAPGP40121 348 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 MTF1Q14872 753 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 POSTNQ15063 836 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 NFIL3Q16649 462 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 MTHFSDQ2M296 383 aaKnown RBP0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 SLC9B1Q4ZJI4 515 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 ANKRD45Q5TZF3 282 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 RNLSQ5VYX0 342 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 KLC3Q6P597 504 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 ZCCHC12Q6PEW1 402 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 IGFL2Q6UWQ7 119 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 RRM2BQ7LG56 351 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 SDCCAG8Q86SQ7 713 aaPredicted RBP0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 CATSPERDQ86XM0 798 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 KIRREL3Q8IZU9 778 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 NPRL2Q8WTW4 380 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 ELAC2Q9BQ52 826 aaKnown RBP0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 FAM167BQ9BTA0 163 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 INTS2Q9H0H0 1204 aaKnown RBP0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 PARLQ9H300 379 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 MED20Q9H944 212 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 A4GALTQ9NPC4 353 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 HCN3Q9P1Z3 774 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 GJD2Q9UKL4 321 aa0.91□□□□□ -2.26
RNU6-239P-201ENST00000390990 GAGE10A6NGK3 116 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 RSPH10B2B2RC85 870 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 TMEM189-UBE2V1I3L0A0 370 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ATP2A1O14983 1001 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZBTB43O43298 467 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 TMCC2O75069 709 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 JRKO75564 520 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 RSPH10BP0C881 870 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 SETSIPP0DME0 302 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 COX7A2P14406 83 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZNF182P17025 639 aaPredicted RBP0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 SERPINB3P29508 390 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 PSMC4P43686 418 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 UCNP55089 124 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 PRKCZQ05513 592 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 UBE2V1Q13404 147 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 DCTN2Q13561 401 aaKnown RBP0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 LYSMD4Q5XG99 296 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZNF530Q6P9A1 599 aaPredicted RBP0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 SLC25A47Q6Q0C1 308 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 REG3GQ6UW15 175 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZNF534Q76KX8 674 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZSCAN2Q7Z7L9 614 aaPredicted RBP0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 MAML2Q8IZL2 1156 aaPredicted RBP0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 METTL4Q8N3J2 472 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 KLHDC1Q8N7A1 406 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 RTL3Q8N8U3 475 aaKnown RBP0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 MYRIPQ8NFW9 859 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ZNF721Q8TF20 911 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 PHYHIPLQ96FC7 376 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ATXN7L3BQ96GX2 97 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 EGLN2Q96KS0 407 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 TMEM39BQ9GZU3 492 aa0.9□□□□□ -2.27
RNU6-239P-201ENST00000390990 ADNPQ9H2P0 1102 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms