RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 LRRC46Q96FV0 321 aa-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 GRAMD2BQ96HH9 432 aa-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 STRBPQ96SI9 672 aaKnown RBP-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 UBAC1Q9BSL1 405 aa-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 B3GNT5Q9BYG0 378 aa-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 GLIS2Q9BZE0 524 aaPredicted RBP-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 RAB6CQ9H0N0 254 aa-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 CCDC8Q9H0W5 538 aaPredicted RBP-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 B3GAT2Q9NPZ5 323 aa-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 BEX4Q9NWD9 120 aaPredicted RBP-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 GTF3C3Q9Y5Q9 886 aa-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 RFNGQ9Y644 331 aa-0.67□□□□□ -2.52
TRAJ53-201ENST00000390485 ARHGEF40Q8TER5 1519 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 ABHD14A-ACY1A0A1B0GW23 586 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 TMEM8BA6NDV4 472 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 TEX22C9J3V5 150 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 IRAK2O43187 625 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 DAB1O75553 588 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 DCNP07585 359 aaKnown RBP-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 ZNF286BP0CG31 522 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 ETFAP13804 333 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 VCAM1P19320 739 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 EFNA1P20827 205 aaPredicted RBP-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 COL8A2P25067 703 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 PDHA2P29803 388 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 LIG4P49917 911 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 MMP15P51511 669 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 MVDP53602 400 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 CDH11P55287 796 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 ADARB1P78563 741 aaKnown RBP-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 PLA2G7Q13093 441 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 TDGQ13569 410 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 MTMR1Q13613 665 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 C2orf68Q2NKX9 166 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 AP5B1Q2VPB7 878 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 C9orf66Q5T8R8 295 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 NDUFAF5Q5TEU4 345 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 CES4AQ5XG92 561 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 OTPQ5XKR4 325 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 GGNBP1Q5YKI7 109 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 CHMP1BQ7LBR1 199 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 NOXA1Q86UR1 476 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 CHD1LQ86WJ1 897 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 KIAA0319LQ8IZA0 1049 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 GBGT1Q8N5D6 347 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 CCDC150Q8NCX0 1101 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 KBTBD8Q8NFY9 601 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 GDPD5Q8WTR4 605 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 SMARCD2Q92925 531 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 ARRDC3Q96B67 414 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 FBXL8Q96CD0 374 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 CNRIP1Q96F85 164 aaPredicted RBP-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 EIF2AK1Q9BQI3 630 aaKnown RBP-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 MXRA8Q9BRK3 442 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 ZNF2Q9BSG1 426 aaPredicted RBP-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 LRRC27Q9C0I9 530 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 VCXQ9H320 206 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 ENTPD7Q9NQZ7 604 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 MAN2C1Q9NTJ4 1040 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 FBXO9Q9UK97 447 aaPredicted RBP-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 SUFUQ9UMX1 484 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 L1RE1Q9UN81 338 aa-0.68□□□□□ -2.52
TRAJ53-201ENST00000390485 LTBP1Q14766 1721 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 FER1L5A0AVI2 2057 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 FAM90A26D6RGX4 464 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 G3V2L1 256 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 CEACAM4O75871 244 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 SNUPNO95149 360 aaKnown RBP-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 STBD1O95210 358 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 MLYCDO95822 493 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 GLP2RO95838 553 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 PNPP00491 289 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 KRT19P08727 400 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 PCP11498 1178 aaKnown RBP-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 CDH5P33151 784 aaPredicted RBP-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 APOBEC1P41238 236 aaKnown RBP-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 CDK7P50613 346 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 SLC12A3P55017 1021 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 MFAP1P55081 439 aaKnown RBP-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 CSNK2BP67870 215 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 FOXD4Q12950 439 aaPredicted RBP-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 BYSLQ13895 437 aaKnown RBP-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 KIAA0040Q15053 153 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 ZNF146Q15072 292 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 FBXO43Q4G163 708 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 KLHL26Q53HC5 615 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 TAF7LQ5H9L4 462 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 TMCO4Q5TGY1 634 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 LEMD1Q68G75 181 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 FAAH2Q6GMR7 532 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 GJB7Q6PEY0 223 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 SLC25A34Q6PIV7 304 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 TMUB2Q71RG4 321 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 PRSS45Q7RTY3 260 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 OVCH2Q7RTZ1 564 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 PTOV1Q86YD1 416 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 NAXDQ8IW45 347 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 GPALPP1Q8IXQ4 340 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 KIRREL3Q8IZU9 778 aa-0.69□□□□□ -2.52
TRAJ53-201ENST00000390485 RELL2Q8NC24 303 aaPredicted RBP-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms