RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 GPC4O75487 556 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 RPS17P08708 135 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 ACADMP11310 421 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 EPHA3P29320 983 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 PDHA2P29803 388 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 PRDX3P30048 256 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 SERPINB5P36952 375 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 GDF5P43026 501 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 FOXA1P55317 472 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 RPS21P63220 83 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 CDK3Q00526 305 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 ABRQ12979 859 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 CRY1Q16526 586 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 FBXO43Q4G163 708 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 SYTL3Q4VX76 610 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 EOGTQ5NDL2 527 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 ANKS6Q68DC2 871 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 CYB5D1Q6P9G0 228 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 UBE2R2Q712K3 238 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 CLNKQ7Z7G1 428 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 DCBLD1Q8N8Z6 715 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 HMGB4Q8WW32 186 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 ASZ1Q8WWH4 475 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 FAM131CQ96AQ9 280 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 KLHL29Q96CT2 875 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 OR52B2Q96RD2 323 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 KCNA7Q96RP8 456 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 FBRSQ9HAH7 460 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 EML4Q9HC35 981 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 MID1IP1Q9NPA3 183 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 DNAJC28Q9NX36 388 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 KLHL42Q9P2K6 505 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 PCTPQ9UKL6 214 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 DUSP12Q9UNI6 340 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 PDE10AQ9Y233 779 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 A0A0C4DFX4 3053 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 MUC3AQ02505 3323 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 KLHL33A6NCF5 533 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 STX16-NPEPL1H3BU86 382 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 STX16O14662 325 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 SLC31A1O15431 190 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 ENO3P13929 434 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 GABRG2P18507 467 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 ACSL1P33121 698 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 HSPA7P48741 367 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 ELF3P78545 371 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 SGCGQ13326 291 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 TMEM259Q4ZIN3 620 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 ADAMTSL4Q6UY14 1074 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 GBP7Q8N8V2 638 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 TP53I13Q8NBR0 393 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 COX14Q96I36 57 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 RSRC1Q96IZ7 334 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 SIKE1Q9BRV8 207 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 C1QTNF2Q9BXJ5 285 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 SLC17A9Q9BYT1 436 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 CIDEBQ9UHD4 219 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 APOBEC2Q9Y235 224 aaKnown RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 STK38LQ9Y2H1 464 aa11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.95□□□□□ -0.5
SPTBN1-203ENST00000389980 KNL1Q8NG31 2342 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 E9PBE3 544 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 QSOX1O00391 747 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 E2F3O00716 465 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 KPNA5O15131 536 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 KLHL41O60662 606 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 SLCO2B1O94956 709 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 CBX6O95503 412 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 S100BP04271 92 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 CHRNB1P11230 501 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 VCLP18206 1134 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 RPIAP49247 311 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 TPMTP51580 245 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 ZNF852Q6ZMS4 543 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 CFAP206Q8IYR0 622 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 PDPRQ8NCN5 879 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 ZNF483Q8TF39 744 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 ASB11Q8WXH4 323 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 RHBDF1Q96CC6 855 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 TRMOQ9BU70 441 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 ZCCHC2Q9C0B9 1178 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 TM7SF3Q9NS93 570 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 TRAF6Q9Y4K3 522 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 SLC5A10A0PJK1 596 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 NQO1P15559 274 aaKnown RBP11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 BTKQ06187 659 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 GALNT1Q10472 559 aaPredicted RBP11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 LCP2Q13094 533 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 GTF2H3Q13889 308 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 RBBP7Q16576 425 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 BCL7AQ4VC05 210 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 XKR5Q6UX68 686 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 HORMAD1Q86X24 394 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 CDK15Q96Q40 435 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 TMEM79Q9BSE2 394 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 HGH1Q9BTY7 390 aa11.94□□□□□ -0.5
SPTBN1-203ENST00000389980 LMAN1LQ9HAT1 526 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms