RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 DNAJB13P59910 316 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 HSPA14Q0VDF9 509 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ATAD3BQ5T9A4 648 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 SULT1C3Q6IMI6 304 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ANKRD26P1Q6NSI1 321 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 DLK2Q6UY11 383 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 CIR1Q86X95 450 aaPredicted RBP14.06□□□□□ -0.16
RTF1-201ENST00000389629 TRIM48Q8IWZ4 208 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 LRRC17Q8N6Y2 441 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 PIH1D2Q8WWB5 315 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 APOLD1Q96LR9 279 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 OLAHQ9NV23 265 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 C14orf119Q9NWQ9 140 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 ERVK-18Q9QC07 812 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 PCDHGA4Q9Y5G9 962 aa14.06□□□□□ -0.16
RTF1-201ENST00000389629 RREB1Q92766 1687 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 FUCA1P04066 466 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 LPOP22079 712 aaPredicted RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 NANOGP8Q6NSW7 305 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 USP43Q70EL4 1123 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 ADAMTSL2Q86TH1 951 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 IRGQQ8WZA9 623 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 TMEM246Q9BRR3 403 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 NANOGQ9H9S0 305 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 PCDHGA10Q9Y5H3 936 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 M0QX08 132 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 DCLK1O15075 740 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 BEST1O76090 585 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 PFKMP08237 780 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 IQCF3P0C7M6 154 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 ZNF678Q5SXM1 525 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 UBE2UQ5VVX9 321 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 PLEKHG7Q6ZR37 379 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 ASCC1Q8N9N2 400 aaKnown RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 C2CD4AQ8NCU7 369 aaPredicted RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 TINF2Q9BSI4 451 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 LRTM1Q9HBL6 345 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 ENPP3O14638 875 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 OXTRP30559 389 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 RPS3AP61247 264 aaKnown RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 ERVK-8P63133 956 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 BNC1Q01954 994 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 KRT33BQ14525 404 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 ANGPT1Q15389 498 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 KCNJ8Q15842 424 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 ATP6AP1Q15904 470 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 TECRLQ5HYJ1 363 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 RTL3Q8N8U3 475 aaKnown RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 TMCO6Q96DC7 493 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 ING4Q9UNL4 249 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 LRRC14BA6NHZ5 514 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 MMP3P08254 477 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 GSTM5P46439 218 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 HCAR3P49019 387 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 VEPH1Q14D04 833 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 CCBE1Q6UXH8 406 aaPredicted RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 ZNF517Q6ZMY9 492 aaPredicted RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 CYP4Z1Q86W10 505 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 LIX1Q8N485 282 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 C2orf69Q8N8R5 385 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 HDAC2Q92769 488 aaKnown RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 NARS2Q96I59 477 aaKnown RBP14.05□□□□□ -0.16
RTF1-201ENST00000389629 ASB8Q9H765 288 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 ST3GAL5Q9UNP4 418 aa14.05□□□□□ -0.16
RTF1-201ENST00000389629 MYH9P35579 1960 aaKnown RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 ARSAP15289 507 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 ZNF24P17028 368 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 ZNF26P17031 533 aaPredicted RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 POLR2EP19388 210 aaKnown RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 ALDH9A1P49189 494 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 AKR1D1P51857 326 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 PTPN5P54829 565 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 SLC10A7Q0GE19 358 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 KRT74Q7RTS7 529 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 CPNE9Q8IYJ1 553 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 NPWQ8N729 165 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 ZFP90Q8TF47 636 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 NSUN5Q96P11 429 aaKnown RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 TTYH2Q9BSA4 534 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 TRPC4Q9UBN4 977 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 SLC28A1O00337 649 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 TREHO43280 583 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 RFPL2O75678 378 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 PRKAR1AP10644 381 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 PABPC1P11940 636 aaKnown RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 DGKAP23743 735 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 PSMA1P25786 263 aaKnown RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 SMARCB1Q12824 385 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 PCBP1Q15365 356 aaKnown RBP eCLIP14.04□□□□□ -0.166e-7■■■□□ 15.8
RTF1-201ENST00000389629 TAF1CQ15572 869 aaPredicted RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 CACTIN-AS1Q8N1I8 211 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 STK40Q8N2I9 435 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 SIDT2Q8NBJ9 832 aaKnown RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 TBC1D15Q8TC07 691 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 LRRC20Q8TCA0 184 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 PIK3R3Q92569 461 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 MEAF6Q9HAF1 191 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 FAM105AQ9NUU6 356 aa14.04□□□□□ -0.16
RTF1-201ENST00000389629 INTS7Q9NVH2 962 aaKnown RBP14.04□□□□□ -0.16
RTF1-201ENST00000389629 PAK1IP1Q9NWT1 392 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms