RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 BMP10O95393 424 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 CLDN7O95471 211 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 CNPP09543 421 aaKnown RBP14.7□□□□□ -0.06
SCFD2-201ENST00000388940 BPIP17213 487 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 HSPA7P48741 367 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 MAD2L1Q13257 205 aaPredicted RBP14.7□□□□□ -0.06
SCFD2-201ENST00000388940 PWP1Q13610 501 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 TXNDC8Q6A555 127 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 HTR3DQ70Z44 454 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 DEFB128Q7Z7B8 93 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 FIBCD1Q8N539 461 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 TRIML2Q8N7C3 387 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 RHBDF1Q96CC6 855 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 C17orf80Q9BSJ5 609 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 NTMT1Q9BV86 223 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 RPF2Q9H7B2 306 aaKnown RBP14.7□□□□□ -0.06
SCFD2-201ENST00000388940 ATP13A3Q9H7F0 1226 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 ABCB8Q9NUT2 735 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 KLHL42Q9P2K6 505 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 LSM7Q9UK45 103 aaKnown RBP14.7□□□□□ -0.06
SCFD2-201ENST00000388940 OAZ3Q9UMX2 235 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 CEPT1Q9Y6K0 416 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 PIKFYVEQ9Y2I7 2098 aa14.7□□□□□ -0.06
SCFD2-201ENST00000388940 RNF103-CHMP3A0A140T963 221 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 TRIM64A6NGJ6 449 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 SLC28A1O00337 649 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 SCAMP3O14828 347 aaKnown RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 RGS14O43566 566 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 IGSF6O95976 241 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 NCK1P16333 377 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 SPAM1P38567 509 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 ARL1P40616 181 aaPredicted RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 CASP2P42575 452 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 DEFB115Q30KQ5 88 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 RFTN2Q52LD8 501 aaPredicted RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 TTC23LQ6PF05 361 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 AADATQ8N5Z0 425 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 FAM47BQ8NA70 645 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 OR8J3Q8NGG0 315 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 DIS3LQ8TF46 1054 aaKnown RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 CGREF1Q99674 301 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 MRPL17Q9NRX2 175 aaKnown RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 ASIC5Q9NY37 505 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 KIAA1522Q9P206 1035 aaPredicted RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 OPTCQ9UBM4 332 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 TRPS1Q9UHF7 1281 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 TPST1O60507 370 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 KATNA1O75449 491 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 ZNF821O75541 412 aaPredicted RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 TRIM16O95361 564 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 EBLN1P0CF75 366 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 VARSP26640 1264 aaKnown RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 ARHGEF6Q15052 776 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 CHRNA6Q15825 494 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 CDKL4Q5MAI5 379 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 GLYATQ6IB77 296 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 ANKRD33Q7Z3H0 272 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 TRIM46Q7Z4K8 759 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 RIMKLAQ8IXN7 391 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 NXPE1Q8N323 547 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 TNIP2Q8NFZ5 429 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 OR6K2Q8NGY2 324 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 FIBINQ8TAL6 211 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 ADAMTS16Q8TE57 1224 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 OSCP1Q8WVF1 389 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 ZNF689Q96CS4 500 aaPredicted RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 MPP4Q96JB8 637 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 CRLS1Q9UJA2 301 aa14.69□□□□□ -0.06
SCFD2-201ENST00000388940 EIF3LQ9Y262 564 aaKnown RBP14.69□□□□□ -0.06
SCFD2-201ENST00000388940 K7EPI3 171 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 ARHGEF15O94989 841 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 GUCA1CO95843 209 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 LDLRP01130 860 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 URODP06132 367 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 CBSLP0DN79 551 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 CDH1P12830 882 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 ITGB6P18564 788 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 UGT1A1P22309 533 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 UGT1A4P22310 534 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 UGT1A3P35503 534 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 UGT1A5P35504 534 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 CBSP35520 551 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 OR4D2P58180 307 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 PHKG1Q16816 387 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 TTLL9Q3SXZ7 439 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 MPPE1Q53F39 396 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 SPOUT1Q5T280 376 aaKnown RBP14.68□□□□□ -0.06
SCFD2-201ENST00000388940 CNKSR3Q6P9H4 555 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 TPGS1Q6ZTW0 290 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 DDX53Q86TM3 631 aaKnown RBP14.68□□□□□ -0.06
SCFD2-201ENST00000388940 CLDN19Q8N6F1 224 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 GLB1L3Q8NCI6 653 aaPredicted RBP14.68□□□□□ -0.06
SCFD2-201ENST00000388940 BPIFB1Q8TDL5 484 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 NSMCE2Q96MF7 247 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 PPIL1Q9Y3C6 166 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 POLR3HQ9Y535 204 aaPredicted RBP14.68□□□□□ -0.06
SCFD2-201ENST00000388940 ANGPTL3Q9Y5C1 460 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 PCDHGA4Q9Y5G9 962 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 PLXNB3Q9ULL4 1909 aa14.68□□□□□ -0.06
SCFD2-201ENST00000388940 CCDC160A6NGH7 325 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms