RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 TBL1XO60907 577 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 XYLBO75191 536 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 CAPN1P07384 714 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 AGXTP21549 392 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 SMAD3P84022 425 aaKnown RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 MEP1AQ16819 746 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 AASDHQ4L235 1098 aaPredicted RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 CTSL3PQ5NE16 218 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 IL27RAQ6UWB1 636 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 IL37Q9NZH6 218 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 PCDHB9Q9Y5E1 797 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 PCDHGA8Q9Y5G5 932 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 VWA8A3KMH1 1905 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 HTR1AP08908 422 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 THRBP10828 461 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 CDH1P12830 882 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 PRKG2Q13237 762 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 DAG1Q14118 895 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 RFTN2Q52LD8 501 aaPredicted RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 PDCD4Q53EL6 469 aaKnown RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 TXNDC8Q6A555 127 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 ARL14EPQ8N8R7 260 aaPredicted RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 OR10Q1Q8NGQ4 319 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 VAPAQ9P0L0 249 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 ANKRD36A6QL64 1941 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 FAM92AA1XBS5 289 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 INSIG1O15503 277 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 OCM2P0CE71 109 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 OCMP0CE72 109 aaPredicted RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 UMPSP11172 480 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 PRKACGP22612 351 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 MAPKAPK2P49137 400 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 ALDH3A2P51648 485 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 ELAVL2Q12926 359 aaKnown RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 PTGR1Q14914 329 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 PIWIL3Q7Z3Z3 882 aaKnown RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 RBM23Q86U06 439 aaKnown RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 ZNF296Q8WUU4 475 aaPredicted RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 ITCHQ96J02 903 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 COX4I2Q96KJ9 171 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 TBCDQ9BTW9 1192 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 VN1R3Q9BXE9 311 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 ABCG8Q9H221 673 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 PDFQ9HBH1 243 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 NLE1Q9NVX2 485 aaPredicted RBP16■□□□□ 0.15
NKX3-1-201ENST00000380871 SELENONQ9NZV5 590 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 SH3GLB1Q9Y371 365 aa16■□□□□ 0.15
NKX3-1-201ENST00000380871 TRIM64BA6NI03 449 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 STX7O15400 261 aaKnown RBP15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 NOL3O60936 208 aaKnown RBP15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 IGLV3-27P01718 113 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 ALPIP09923 528 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 PLA2G16P53816 162 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 CBX3Q13185 183 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 NR6A1Q15406 480 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 CTU2Q2VPK5 515 aaKnown RBP15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 TPGS1Q6ZTW0 290 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 GPSM1Q86YR5 675 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 DDHD1Q8NEL9 900 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 CD200R1Q8TD46 325 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 CLSTN3Q9BQT9 956 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 AMBRA1Q9C0C7 1298 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 RNF208Q9H0X6 261 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 TBCCD1Q9NVR7 557 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 FNIP2Q9P278 1114 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 ZMYM5Q9UJ78 669 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 COQ6Q9Y2Z9 468 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 GREB1Q4ZG55 1949 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 SEC14L2O76054 403 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 CRHBPP24387 322 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 TTKP33981 857 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 TUFMP49411 452 aaKnown RBP15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 CD300CQ08708 224 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 NR1D2Q14995 579 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 CYP20A1Q6UW02 462 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 SNX29P2Q8IUI4 249 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 OR56A4Q8NGH8 313 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 METTL6Q8TCB7 284 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 TSPEARQ8WU66 669 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 FATE1Q969F0 183 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 CGREF1Q99674 301 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 MUC13Q9H3R2 512 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 TMEM165Q9HC07 324 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 SYCE1LA8MT33 242 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 PRAMEF12O95522 483 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 MC4RP32245 332 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 RING1Q06587 406 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 AQP6Q13520 282 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 SPCS2Q15005 226 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 ABRAXAS2Q15018 415 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 PROSER1Q86XN7 944 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 C17orf80Q9BSJ5 609 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 NUSAP1Q9BXS6 441 aaKnown RBP15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 MAGEH1Q9H213 219 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 ZIM2Q9NZV7 527 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 WARS2Q9UGM6 360 aaKnown RBP15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 PCDHB3Q9Y5E6 796 aa15.99■□□□□ 0.15
NKX3-1-201ENST00000380871 GBF1Q92538 1859 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 FUOMA2VDF0 154 aa15.98■□□□□ 0.15
NKX3-1-201ENST00000380871 MLYCDO95822 493 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms