RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 TBK1Q9UHD2 729 aa18.4■□□□□ 0.54
SMN2-202ENST00000380742 EP300Q09472 2414 aaPredicted RBP18.39■□□□□ 0.54
SMN2-202ENST00000380742 C4orf47A7E2U8 309 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 B4DGG1 531 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 TRIM49D1C9J1S8 452 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 RASGRF2O14827 1237 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 PHGDHO43175 533 aaKnown RBP18.39■□□□□ 0.53
SMN2-202ENST00000380742 GFRA3O60609 400 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 F3P13726 295 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 CD59P13987 128 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 STMN1P16949 149 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 CSRP3P50461 194 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 SLC12A2P55011 1212 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 RAB10P61026 200 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 CASP8Q14790 479 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 UAP1L1Q3KQV9 507 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 TTLL9Q3SXZ7 439 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 C6orf132Q5T0Z8 1188 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 CAPRIN2Q6IMN6 1127 aaKnown RBP18.39■□□□□ 0.53
SMN2-202ENST00000380742 IYDQ6PHW0 289 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 TAOK1Q7L7X3 1001 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 CYP4X1Q8N118 509 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 EID2Q8N6I1 236 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 OR4C6Q8NH72 309 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 TSPAN17Q96FV3 270 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 RMDN2Q96LZ7 410 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 TMEM109Q9BVC6 243 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 ROPN1BQ9BZX4 212 aaPredicted RBP18.39■□□□□ 0.53
SMN2-202ENST00000380742 ROPN1Q9HAT0 212 aaPredicted RBP18.39■□□□□ 0.53
SMN2-202ENST00000380742 POPDC3Q9HBV1 291 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 SIRPGQ9P1W8 387 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 BTBD3Q9Y2F9 522 aa18.39■□□□□ 0.53
SMN2-202ENST00000380742 COL5A1P20908 1838 aaPredicted RBP18.38■□□□□ 0.53
SMN2-202ENST00000380742 TRBV23OR9-2A0A075B6M9 112 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 TLDC2A0PJX2 215 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 NOBOXO60393 691 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 KRT37O76014 449 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 ALDOAP04075 364 aaKnown RBP18.38■□□□□ 0.53
SMN2-202ENST00000380742 SNRPAP09012 282 aaKnown RBP18.38■□□□□ 0.53
SMN2-202ENST00000380742 SLC35G4P0C7Q5 338 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 GMPRP36959 345 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 PLOD1Q02809 727 aaPredicted RBP18.38■□□□□ 0.53
SMN2-202ENST00000380742 ZNF844Q08AG5 666 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 SLC14A1Q13336 389 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 SUZ12Q15022 739 aaKnown RBP18.38■□□□□ 0.53
SMN2-202ENST00000380742 RASA2Q15283 850 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 LGSNQ5TDP6 509 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 OGFOD3Q6PK18 319 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 MZB1Q8WU39 189 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 EEF1AKMT1Q8WVE0 214 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 ISL2Q96A47 359 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 INSM2Q96T92 566 aaPredicted RBP18.38■□□□□ 0.53
SMN2-202ENST00000380742 SNX15Q9NRS6 342 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 ZNF624Q9P2J8 865 aaPredicted RBP18.38■□□□□ 0.53
SMN2-202ENST00000380742 TSR3Q9UJK0 312 aaKnown RBP18.38■□□□□ 0.53
SMN2-202ENST00000380742 ANKRD12Q6UB98 2062 aa18.38■□□□□ 0.53
SMN2-202ENST00000380742 IQANK1A0A1B0GTG1 560 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 OR52A4PA6NMU1 304 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 CDH16O75309 829 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 TSPAN12O95859 305 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 ZNF37AP17032 561 aaPredicted RBP18.37■□□□□ 0.53
SMN2-202ENST00000380742 ACADLP28330 430 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 MAGEA12P43365 314 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 SERPINB8P50452 374 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 STPG1Q5TH74 334 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 CYHR1Q6ZMK1 362 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 PDZD3Q86UT5 571 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 ANKRD49Q8WVL7 239 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 ZBTB9Q96C00 473 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 DUSP23Q9BVJ7 150 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 GPAMQ9HCL2 828 aa18.37■□□□□ 0.53
SMN2-202ENST00000380742 CFAP20Q9Y6A4 193 aaKnown RBP18.37■□□□□ 0.53
SMN2-202ENST00000380742 FOXO6A8MYZ6 492 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 SIGLEC6O43699 453 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 SLC35E2BP0CK96 405 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 CBSLP0DN79 551 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 ALPPL2P10696 532 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 MYF5P13349 255 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 TYK2P29597 1187 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 ATP5DP30049 168 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 CBSP35520 551 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 HALP42357 657 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 IL2P60568 153 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 ABRQ12979 859 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 RPE65Q16518 533 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 PPM1JQ5JR12 505 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 ZCCHC8Q6NZY4 707 aaKnown RBP18.36■□□□□ 0.53
SMN2-202ENST00000380742 DUS1LQ6P1R4 473 aaKnown RBP18.36■□□□□ 0.53
SMN2-202ENST00000380742 LRIG3Q6UXM1 1119 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 TIFABQ6ZNK6 161 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 C17orf82Q86X59 251 aaPredicted RBP18.36■□□□□ 0.53
SMN2-202ENST00000380742 SLC35F3Q8IY50 421 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 SFRP1Q8N474 314 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 KYQ8NBH2 561 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 GPR156Q8NFN8 814 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 SLC37A2Q8TED4 501 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 MTBPQ96DY7 904 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 LINGO1Q96FE5 620 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 C12orf66Q96MD2 445 aa18.36■□□□□ 0.53
SMN2-202ENST00000380742 RUVBL2Q9Y230 463 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms