RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 ZNF460Q14592 562 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 PLEKHS1Q5SXH7 462 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 MROH9Q5TGP6 573 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 CAPRIN2Q6IMN6 1127 aaKnown RBP12.39□□□□□ -0.43
SMN1-202ENST00000380707 FAM45BPQ6NSW5 357 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 ALYREFQ86V81 257 aaKnown RBP12.39□□□□□ -0.43
SMN1-202ENST00000380707 CEP97Q8IW35 865 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 SLC35F3Q8IY50 421 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 SLC22A15Q8IZD6 547 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 SFRP1Q8N474 314 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 FAM181AQ8N9Y4 354 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 KYQ8NBH2 561 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 GPR156Q8NFN8 814 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 FAM45AQ8TCE6 357 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 INPP5DQ92835 1189 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 APOLD1Q96LR9 279 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 RMDN2Q96LZ7 410 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 ZNF624Q9P2J8 865 aaPredicted RBP12.39□□□□□ -0.43
SMN1-202ENST00000380707 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 CFAP20Q9Y6A4 193 aaKnown RBP12.39□□□□□ -0.43
SMN1-202ENST00000380707 IKBKGQ9Y6K9 419 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 U3KQA8 63 aa12.39□□□□□ -0.43
SMN1-202ENST00000380707 GOLGA4Q13439 2230 aaKnown RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 PRAMEF33A0A0G2JMD5 474 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 ERLIN1O75477 346 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 SLC35G4P0C7Q5 338 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 MAZP56270 477 aaKnown RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 POU4F1Q01851 419 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 PLOD1Q02809 727 aaPredicted RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 ILF2Q12905 390 aaKnown RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 TMED2Q15363 201 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 RPE65Q16518 533 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 PROX2Q3B8N5 592 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 INAVAQ3KP66 663 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 ACSBG2Q5FVE4 666 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 BEND6Q5SZJ8 279 aaPredicted RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 ADGRD1Q6QNK2 874 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 PAQR3Q6TCH7 311 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 TMEM207Q6UWW9 146 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 PIP4P1Q86T03 277 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 C17orf82Q86X59 251 aaPredicted RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 ARL14Q8N4G2 192 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 ARL10Q8N8L6 244 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 OR2W6PQ8NHA6 318 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 BAHD1Q8TBE0 780 aaPredicted RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 NETO1Q8TDF5 533 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 SLC37A2Q8TED4 501 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 HNRNPLLQ8WVV9 542 aaKnown RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 INSM2Q96T92 566 aaPredicted RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 CCDC77Q9BR77 488 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 FETUBQ9UGM5 382 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 TRMT6Q9UJA5 497 aaKnown RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 TSR3Q9UJK0 312 aaKnown RBP12.38□□□□□ -0.43
SMN1-202ENST00000380707 ZNF180Q9UJW8 692 aa12.38□□□□□ -0.43
SMN1-202ENST00000380707 KIR2DS5A0A0G2JLQ3 304 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 A0A0G2JNG1 304 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 KIR2DS3K7RE56 304 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 NUDT17P0C025 328 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 XRCC1P18887 633 aaPredicted RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 ACADLP28330 430 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 SLC19A1P41440 591 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 HALP42357 657 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 PDAP1Q13442 181 aaKnown RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 USP10Q14694 798 aaKnown RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 KIR2DS5Q14953 304 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 C14orf28Q4W4Y0 310 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 UGT3A1Q6NUS8 523 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 PDZD3Q86UT5 571 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 CPNE9Q8IYJ1 553 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 EEF1AKMT1Q8WVE0 214 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 GLMNQ92990 594 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 C12orf66Q96MD2 445 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 CPNE7Q9UBL6 633 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 SLC24A2Q9UI40 661 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 RUVBL2Q9Y230 463 aaKnown RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 OR5K4A6NMS3 321 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 IFRD1O00458 451 aaPredicted RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 TM4SF5O14894 197 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 TCEA3O75764 348 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 KRT38O76015 456 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 TSPAN12O95859 305 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 CKMT1AP12532 417 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 SLC2A4P14672 509 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 SLCO1A2P46721 670 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 SERPINB9P50453 376 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 SLC12A2P55011 1212 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 UBE2IP63279 158 aaKnown RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 ABRQ12979 859 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 ZKSCAN8Q15776 578 aaPredicted RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 TTLL9Q3SXZ7 439 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 DUS1LQ6P1R4 473 aaKnown RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 CYHR1Q6ZMK1 362 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 CMC1Q7Z7K0 106 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 PHC3Q8NDX5 983 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 MAPK15Q8TD08 544 aa12.37□□□□□ -0.43
SMN1-202ENST00000380707 EPS8L3Q8TE67 593 aaKnown RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 SKA2Q8WVK7 121 aaPredicted RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 TFGQ92734 400 aaPredicted RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 CNDP2Q96KP4 475 aaKnown RBP12.37□□□□□ -0.43
SMN1-202ENST00000380707 IMP3Q9NV31 184 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms