RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SKA2Q8WVK7 121 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 CENPNQ96H22 339 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 MOV10Q9HCE1 1003 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 TRMT13Q9NUP7 481 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 THG1LQ9NWX6 298 aaKnown RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 INVSQ9Y283 1065 aa12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 POLR3HQ9Y535 204 aaPredicted RBP12.28□□□□□ -0.44
PRPF40B-202ENST00000380281 KRT87PA6NCN2 255 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC22A2O15244 555 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 DEAF1O75398 565 aaPredicted RBP12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 SLC22A3O75751 556 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 CCNKO75909 580 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 CELF2O95319 508 aaKnown RBP12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 B3GALT4O96024 378 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 UGT2B4P06133 528 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 ZNF865P0CJ78 1059 aaPredicted RBP12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 IL12AP29459 219 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 MRPS15P82914 257 aaKnown RBP12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 PURAQ00577 322 aaKnown RBP12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 VAC14Q08AM6 782 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 INTS11Q5TA45 600 aaKnown RBP12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 SMYD5Q6GMV2 418 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 SPESP1Q6UW49 350 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 SPATC1Q76KD6 591 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 R3HCC1LQ7Z5L2 792 aaKnown RBP12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 GALNT5Q7Z7M9 940 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 PHACTR4Q8IZ21 702 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 SFRP1Q8N474 314 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 TRIB2Q92519 343 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 SDCCAG3Q96C92 435 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 LINGO1Q96FE5 620 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 NSMCE2Q96MF7 247 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 CITED4Q96RK1 184 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 COQ7Q99807 217 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 C9orf16Q9BUW7 83 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 GIMAP4Q9NUV9 329 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 LIMD1Q9UGP4 676 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 ENPP5Q9UJA9 477 aa12.27□□□□□ -0.44
PRPF40B-202ENST00000380281 ACOX3O15254 700 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 TMCC2O75069 709 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 INMTO95050 263 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 CAPN1P07384 714 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 G6PDP11413 515 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 SLC2A4P14672 509 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 POLR2JP52435 117 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 DGCR6Q14129 220 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 GTDC1Q4AE62 458 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 DCP2Q8IU60 420 aaKnown RBP12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 CCDC103Q8IW40 242 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 MINDY2Q8NBR6 621 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 TRPV3Q8NET8 790 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 ARRDC2Q8TBH0 407 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 GLMNQ92990 594 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 FKBP10Q96AY3 582 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 MED30Q96HR3 178 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 TXNDC15Q96J42 360 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 DMRTB1Q96MA1 342 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 SERPINB11Q96P15 392 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 EGFL8Q99944 293 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 SPC25Q9HBM1 224 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 AASDHPPTQ9NRN7 309 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 AGPAT4Q9NRZ5 378 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 GKN1Q9NS71 199 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 ADPRHL2Q9NX46 363 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 TAS2R13Q9NYV9 303 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 TRPV2Q9Y5S1 764 aa12.27□□□□□ -0.45
PRPF40B-202ENST00000380281 TTC34A8MYJ7 566 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 M0R3G1 203 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 ARVCFO00192 962 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 SLC7A4O43246 635 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 TBX1O43435 398 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 DIRAS1O95057 198 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 PEX11BO96011 259 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 ATP6V0D1P61421 351 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 VBP1P61758 197 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 TIAL1Q01085 375 aaKnown RBP eCLIP12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 TRAP1Q12931 704 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 MEP1AQ16819 746 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 BRMS1LQ5PSV4 323 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 ADCK1Q86TW2 530 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 ELMOD2Q8IZ81 293 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 OR10A6Q8NH74 314 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 STAG3L4Q8TBR4 150 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 ZFYVE19Q96K21 471 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 MYOCQ99972 504 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 TRIM15Q9C019 465 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 SMOC2Q9H3U7 446 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 CSNK1G1Q9HCP0 422 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 ZNF225Q9UK10 706 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 BAG5Q9UL15 447 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 MYLKQ15746 1914 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 BRCA1P38398 1863 aaKnown RBP12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 ASPDHA6ND91 283 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 H0Y626 953 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 RAD51BO15315 384 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 DYRK3O43781 588 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 TRIM16O95361 564 aa12.26□□□□□ -0.45
PRPF40B-202ENST00000380281 KRT8P05787 483 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms