RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 SLC39A3Q9BRY0 314 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 ARMC1Q9NVT9 282 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 FAM234BA2RU67 622 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 EIF3FO00303 357 aaPredicted RBP21.17■□□□□ 0.98
TRIM54-202ENST00000380075 MBTPS2O43462 519 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 ZCCHC18P0CG32 403 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SLC6A2P23975 617 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 GKP32189 559 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 NSG1P42857 185 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SMAD4Q13485 552 aaKnown RBP21.17■□□□□ 0.98
TRIM54-202ENST00000380075 TTC23LQ6PF05 361 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 PRR23BQ6ZRT6 265 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 OR2T11Q8NH01 316 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 TCEAL4Q96EI5 215 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 RIPOR3Q96MK2 946 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 ZNF641Q96N77 438 aaPredicted RBP21.17■□□□□ 0.98
TRIM54-202ENST00000380075 ACOX2Q99424 681 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SLC46A2Q9BY10 475 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SUV39H2Q9H5I1 410 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SLC25A13Q9UJS0 675 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 SCN8AQ9UQD0 1980 aa21.17■□□□□ 0.98
TRIM54-202ENST00000380075 C15orf38-AP3S2A0A0A6YYH1 394 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 CCDC154A6NI56 674 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 IFRD1O00458 451 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-202ENST00000380075 SYNCRIPO60506 623 aaKnown RBP21.16■□□□□ 0.98
TRIM54-202ENST00000380075 TRIM16O95361 564 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 CAPN1P07384 714 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 GJA1P17302 382 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 POLR2JP52435 117 aaKnown RBP21.16■□□□□ 0.98
TRIM54-202ENST00000380075 EPHA5P54756 1037 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 EMX2Q04743 252 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 NFYCQ13952 458 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 CBX2Q14781 532 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-202ENST00000380075 SMU1Q2TAY7 513 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 CDKL4Q5MAI5 379 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 CRTC1Q6UUV9 634 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 ARPINQ7Z6K5 226 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 FNDC5Q8NAU1 212 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 LKAAEAR1Q8TD35 194 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 GBP5Q96PP8 586 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 MCCC1Q96RQ3 725 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-202ENST00000380075 ZDHHC3Q9NYG2 299 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 PRSS21Q9Y6M0 314 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 NPIPB15A6NHN6 443 aaPredicted RBP21.16■□□□□ 0.98
TRIM54-202ENST00000380075 OR7A17O14581 309 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 DNAJA2O60884 412 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 MTHFRP42898 656 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 INPP5AQ14642 412 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 LCN8Q6JVE9 175 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 FBXL19Q6PCT2 694 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 UGT2A3Q6UWM9 527 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 Q6ZSR9 355 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 ZSWIM9Q86XI8 627 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 CMTM8Q8IZV2 173 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 OR4F6Q8NGB9 312 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 ITFG1Q8TB96 612 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 EME1Q96AY2 570 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 ULK4Q96C45 1275 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 ASIC4Q96FT7 647 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 KCTD5Q9NXV2 234 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 ACTR3BQ9P1U1 418 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 PCDHA9Q9Y5H5 950 aa21.16■□□□□ 0.98
TRIM54-202ENST00000380075 POP4O95707 220 aaKnown RBP21.15■□□□□ 0.98
TRIM54-202ENST00000380075 UGT1A6P19224 532 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 UGT1A1P22309 533 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 UGT1A4P22310 534 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 UGT1A3P35503 534 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 UGT1A5P35504 534 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 ZFP36L2P47974 494 aaKnown RBP21.15■□□□□ 0.98
TRIM54-202ENST00000380075 PRKG2Q13237 762 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 TLR1Q15399 786 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 PRSS36Q5K4E3 855 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 SLCO4A1Q96BD0 722 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 IPPKQ9H8X2 491 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 IL1RL2Q9HB29 575 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 CMTM6Q9NX76 183 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 THEGQ9P2T0 379 aa21.15■□□□□ 0.98
TRIM54-202ENST00000380075 DOCK6Q96HP0 2047 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 MOSPD3O75425 235 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 PAX7P23759 505 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 HLA-FP30511 346 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 HMOX2P30519 316 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 CA5AP35218 305 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 ARL1P40616 181 aaPredicted RBP21.14■□□□□ 0.98
TRIM54-202ENST00000380075 PIK3CGP48736 1102 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 TRAF3Q13114 568 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 CARD16Q5EG05 197 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 PTCRAQ6ISU1 281 aaPredicted RBP21.14■□□□□ 0.98
TRIM54-202ENST00000380075 IL27RAQ6UWB1 636 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 CYP2R1Q6VVX0 501 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 MILR1Q7Z6M3 343 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 GALNT13Q8IUC8 556 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 CLDN19Q8N6F1 224 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 RPL10LQ96L21 214 aaKnown RBP21.14■□□□□ 0.98
TRIM54-202ENST00000380075 PPP3R2Q96LZ3 170 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 CD244Q9BZW8 370 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 CCM2LQ9NUG4 571 aaPredicted RBP21.14■□□□□ 0.98
TRIM54-202ENST00000380075 MRPS23Q9Y3D9 190 aaKnown RBP21.14■□□□□ 0.98
TRIM54-202ENST00000380075 ANGPTL3Q9Y5C1 460 aa21.14■□□□□ 0.98
TRIM54-202ENST00000380075 AP4B1Q9Y6B7 739 aa21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms