RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 DLX3O60479 287 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 AOC1P19801 751 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 ERVK-21P61565 698 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 BICRALQ6AI39 1079 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 CLIP3Q96DZ5 547 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 ZDHHC2Q9UIJ5 367 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 PRKAR1AP10644 381 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 SLC6A2P23975 617 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 MANFP55145 182 aaKnown RBP14.82□□□□□ -0.04
NPHP4-201ENST00000378156 ADGRE1Q14246 886 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 PAFAH1B3Q15102 231 aaKnown RBP14.82□□□□□ -0.04
NPHP4-201ENST00000378156 LIN54Q6MZP7 749 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 SATL1Q86VE3 508 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 OR13C4Q8NGS5 318 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 PHF10Q8WUB8 498 aaKnown RBP14.82□□□□□ -0.04
NPHP4-201ENST00000378156 NFKBIL1Q9UBC1 381 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-201ENST00000378156 MAGEL2Q9UJ55 1249 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 ARL5AQ9Y689 179 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 BTN3A3O00478 584 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 UROSP10746 265 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 GALK1P51570 392 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 CLDN10P78369 228 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 IRAK1BP1Q5VVH5 260 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF461Q8TAF7 563 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 TUBGCP5Q96RT8 1024 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 COMMD9Q9P000 198 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 ADGRE2Q9UHX3 823 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 OR10H1Q9Y4A9 318 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 SAGE2PA6NJ88 616 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 AGRPO00253 132 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 SERPINB7O75635 380 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 CYP4F2P78329 520 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 C5orf22Q49AR2 442 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 TIFABQ6ZNK6 161 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 SERINC5Q86VE9 423 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 C2orf73Q8N5S3 287 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-201ENST00000378156 MCFD2Q8NI22 146 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 NAT14Q8WUY8 206 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 REXO5Q96IC2 774 aaKnown RBP14.82□□□□□ -0.04
NPHP4-201ENST00000378156 SLC9A8Q9Y2E8 581 aa14.82□□□□□ -0.04
NPHP4-201ENST00000378156 OR4F21O95013 312 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 CCR3P51677 355 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 SULT1C3Q6IMI6 304 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 KLHL35Q6PF15 583 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 FAM180AQ6UWF9 173 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 PLD6Q8N2A8 252 aaKnown RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 HPS1Q92902 700 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 POLR3BQ9NW08 1133 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 SAMHD1Q9Y3Z3 626 aaKnown RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 ECDO95905 644 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 NCK1P16333 377 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 PARP8Q8N3A8 854 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 SIDT2Q8NBJ9 832 aaKnown RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 COQ10BQ9H8M1 238 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 CIDEBQ9UHD4 219 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 ZNF780BQ9Y6R6 833 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 MYO9BQ13459 2157 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 SIX3O95343 332 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 TGFBR2P37173 567 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 SLC10A2Q12908 348 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 GTF2H2Q13888 395 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 GTF2H2CQ6P1K8 395 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 SAPCD2Q86UD0 394 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 ALG2Q9H553 416 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 EIF2B4Q9UI10 523 aaKnown RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 NENFQ9UMX5 172 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 J3KR12 359 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 ENO2P09104 434 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-201ENST00000378156 ASMTP46597 345 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 CHIT1Q13231 466 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 PYDC2Q56P42 97 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 TMEM220Q6QAJ8 160 aa14.81□□□□□ -0.04
NPHP4-201ENST00000378156 COL2A1P02458 1487 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ENPP3O14638 875 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 SSNA1O43805 119 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 OR6B1O95007 311 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ASLP04424 464 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 GJA1P17302 382 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 ACVRL1P37023 503 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CAPGP40121 348 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 EGFLAMQ63HQ2 1017 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 GALNT13Q8IUC8 556 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 SIX5Q8N196 739 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 EEF1AKMT1Q8WVE0 214 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 TRIB2Q92519 343 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CDKN2AIPNLQ96HQ2 116 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 RIPOR3Q96MK2 946 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 VPS35Q96QK1 796 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 SUV39H2Q9H5I1 410 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 STOML2Q9UJZ1 356 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CRYBG1Q9Y4K1 1723 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 IGKV6-21A0A0C4DH24 114 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 MTMR11A4FU01 709 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 SUV39H1O43463 412 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CYP4B1P13584 511 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 BCAP31P51572 246 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 CARD16Q5EG05 197 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 WFIKKN2Q8TEU8 576 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 PRDM8Q9NQV8 689 aa14.8□□□□□ -0.04
NPHP4-201ENST00000378156 PTTG2Q9NZH5 202 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms