RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 REXO4Q9GZR2 422 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 UTS2RQ9UKP6 389 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TRIM17Q9Y577 477 aa14.16□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TARM1B6A8C7 271 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 HHLA1C9JL84 531 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 BCKDKO14874 412 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TRIM24O15164 1050 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 C8BP07358 591 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GJA1P17302 382 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 JAK1P23458 1154 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PRIM2P49643 509 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 BMXP51813 675 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ZXDBP98169 803 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SERINC3Q13530 473 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ANKS3Q6ZW76 656 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 SPATA19Q7Z5L4 167 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 GPR180Q86V85 440 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CARM1Q86X55 608 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 LRRC49Q8IUZ0 686 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 RNF175Q8N4F7 328 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ARL10Q8N8L6 244 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 FNDC8Q8TC99 324 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 AUTS2Q8WXX7 1259 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ANKRD60Q9BZ19 345 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 A0A0U1RQF3 1178 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 CYP7B1O75881 506 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PRKAR2AP13861 404 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 IGFBP5P24593 272 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 POLD2P49005 469 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 PARP15Q460N3 678 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 HECTD3Q5T447 861 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 EPHX4Q8IUS5 362 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 POC5Q8NA72 575 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 TMEM125Q96AQ2 219 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MAGED4Q96JG8 741 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 ACAT2Q9BWD1 397 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 DUS2Q9NX74 493 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 VAPAQ9P0L0 249 aa14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 COL11A1P12107 1806 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1B-201ENST00000376259 MBLAC1A4D2B0 266 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 OR2AG2A6NM03 316 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 INMTO95050 263 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 B3GALT4O96024 378 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 VARSP26640 1264 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ACADVLP49748 655 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 MRPS15P82914 257 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 IRF8Q02556 426 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ADAMTSL2Q86TH1 951 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 CLIP4Q8N3C7 705 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 TMEM199Q8N511 208 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 TAMM41Q96BW9 452 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 MYRFLQ96LU7 910 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 KIAA0100Q14667 2235 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 LTBP3Q9NS15 1303 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 PTPRFP10586 1907 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ACSL4O60488 711 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 PQBP1O60828 265 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 CLDN7O95471 211 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 MATN1P21941 496 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 SHMT2P34897 504 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 CRATP43155 626 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 TXNL4AP83876 142 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 INAQ16352 499 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 SYTL3Q4VX76 610 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 RNF19BQ6ZMZ0 732 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 GOLGA7Q7Z5G4 137 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 PELI3Q8N2H9 469 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 SMYD1Q8NB12 490 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 DACT3Q96B18 629 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 UBXN10Q96LJ8 280 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 LHPPQ9H008 270 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ZDHHC6Q9H6R6 413 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 RAPGEFL1Q9UHV5 662 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 IKZF3Q9UKT9 509 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ANKRD66B4E2M5 251 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 KPNA5O15131 536 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 RAP2AP10114 183 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 TYMPP19971 482 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 S100A5P33763 92 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ADRA1AP35348 466 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 TTLL9Q3SXZ7 439 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 OR4F3Q6IEY1 312 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 OR8H2Q8N162 312 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 PPP3R2Q96LZ3 170 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ZBED2Q9BTP6 218 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 NPLQ9BXD5 320 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ZFYVE1Q9HBF4 777 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 TLR9Q9NR96 1032 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 SDR39U1Q9NRG7 319 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 OGDHLQ9ULD0 1010 aa14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 URB1O60287 2271 aaKnown RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 TRIP12Q14669 1992 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1B-201ENST00000376259 LY75O60449 1722 aa14.13□□□□□ -0.15
TNFRSF1B-201ENST00000376259 FAM234BA2RU67 622 aa14.13□□□□□ -0.15
TNFRSF1B-201ENST00000376259 MGAT4DA6NG13 374 aa14.13□□□□□ -0.15
TNFRSF1B-201ENST00000376259 PGLSO95336 258 aa14.13□□□□□ -0.15
TNFRSF1B-201ENST00000376259 ZNF865P0CJ78 1059 aaPredicted RBP14.13□□□□□ -0.15
TNFRSF1B-201ENST00000376259 BMP2P12643 396 aa14.13□□□□□ -0.15
TNFRSF1B-201ENST00000376259 HNF4AP41235 474 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms