RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 B3GNT9Q6UX72 402 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 PRR23CQ6ZRP0 262 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 Q6ZVU0 165 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 COMMD2Q86X83 199 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 IFNLR1Q8IU57 520 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ARL10Q8N8L6 244 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ZNF671Q8TAW3 534 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 LCN9Q8WX39 176 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ZNF514Q96K75 400 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 KIFC1Q9BW19 673 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 HAPLN2Q9GZV7 340 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 CRISPLD1Q9H336 500 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 TMEM248Q9NWD8 314 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 GULP1Q9UBP9 304 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 MYH13Q9UKX3 1938 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 COL2A1P02458 1487 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 CCDC189A1A4V9 331 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 GTPBP1O00178 669 aaKnown RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 PRG2P13727 222 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 GATMP50440 423 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ATP13A5Q4VNC0 1218 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 PARP8Q8N3A8 854 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ANKRD49Q8WVL7 239 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 DGCR14Q96DF8 476 aaKnown RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 C11orf49Q9H6J7 331 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 INTS7Q9NVH2 962 aaKnown RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 MAT2BQ9NZL9 334 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 TMEM233B4DJY2 109 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 UGT2B17O75795 530 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 GALTP07902 379 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 NR2F6P10588 404 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 CCL5P13501 91 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 IGFBP5P24593 272 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 HMGCS1Q01581 520 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 FPGSQ05932 587 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ZNF366Q8N895 744 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 SMYD1Q8NB12 490 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 ENKURQ8TC29 256 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 RBM4BQ9BQ04 359 aaKnown RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 RBM4Q9BWF3 364 aaKnown RBP13.42□□□□□ -0.26
C9orf47-203ENST00000375851 RAB26Q9ULW5 256 aa13.42□□□□□ -0.26
C9orf47-203ENST00000375851 A0A1B0GW55 424 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 CLDN7O95471 211 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 TOP3BO95985 862 aaKnown RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 DUX4L2P0CJ85 424 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 DUX4L3P0CJ86 424 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 DUX4L4P0CJ87 422 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 DUX4L5P0CJ88 424 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 DUX4L6P0CJ89 424 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 DUX4L7P0CJ90 424 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 THRBP10828 461 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 HOXA11P31270 313 aaPredicted RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 SEC13P55735 322 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 MTPNP58546 118 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 ACTR3P61158 418 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 MED22Q15528 200 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 CCDC92Q53HC0 331 aaPredicted RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 KHDRBS2Q5VWX1 349 aaKnown RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 TIFABQ6ZNK6 161 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 CYP2U1Q7Z449 544 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 AMZ2Q86W34 360 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 KBTBD8Q8NFY9 601 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 KLK6Q92876 244 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 DUX4Q9UBX2 424 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 MAGEB17A8MXT2 336 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 CDC7O00311 574 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 PRAMEF11O60813 436 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 GPR32O75388 356 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 LYNP07948 512 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 SRSF11Q05519 484 aaKnown RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 HEPACAMQ14CZ8 416 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 THAP5Q7Z6K1 395 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 GPR135Q8IZ08 494 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 PLEKHG4BQ96PX9 1271 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 RIOK2Q9BVS4 552 aaKnown RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 BRINP2Q9C0B6 783 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 PCDHAC1Q9H158 963 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 AKTIPQ9H8T0 292 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 TDP1Q9NUW8 608 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 EHD3Q9NZN3 535 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 PTGFRNQ9P2B2 879 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 ZDHHC2Q9UIJ5 367 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 INSL5Q9Y5Q6 135 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 URB1O60287 2271 aaKnown RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 DOT1LQ8TEK3 1739 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 RBM47A0AV96 593 aaKnown RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 LRRC72A6NJI9 287 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 CMPK1P30085 196 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 CCNHP51946 323 aaPredicted RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 COX10Q12887 443 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 PTPN18Q99952 460 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 SPRTNQ9H040 489 aaPredicted RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 SUCOQ9UBS9 1254 aaKnown RBP13.41□□□□□ -0.26
C9orf47-203ENST00000375851 MYH6P13533 1939 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 ADAMTSL3P82987 1691 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 FAM234BA2RU67 622 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 HAS3O00219 553 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 FABP3P05413 133 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 SEC14L1Q92503 715 aa13.41□□□□□ -0.26
C9orf47-203ENST00000375851 SLC9A6Q92581 669 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms