RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 INHBEP58166 350 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 EIF2B5Q13144 721 aaKnown RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 SNAPC1Q16533 368 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 RABL3Q5HYI8 236 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ZDHHC20Q5W0Z9 365 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 BICRALQ6AI39 1079 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 PIM3Q86V86 326 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 FLCNQ8NFG4 579 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 DNAJB8Q8NHS0 232 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ANKRD49Q8WVL7 239 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 FCGR1BQ92637 280 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ERLEC1Q96DZ1 483 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 EBPLQ9BY08 206 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 RBPJLQ9UBG7 517 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ADAMTS6Q9UKP5 1117 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 MAP4K5Q9Y4K4 846 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 NRP1O14786 923 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 PSIP1O75475 530 aaKnown RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 IL1BP01584 269 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 POU2F1P14859 743 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 CD36P16671 472 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ACLYP53396 1101 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 MLLT6P55198 1093 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF280AP59817 542 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 ARHGAP1Q07960 439 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 FOXM1Q08050 763 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 SYT16Q17RD7 645 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 DPY19L1Q2PZI1 675 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 WDR48Q8TAF3 677 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 UPF1Q92900 1129 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 NARS2Q96I59 477 aaKnown RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 B3GALT6Q96L58 329 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 MOCS1Q9NZB8 636 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 GPC6Q9Y625 555 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 MYCLP1P12525 358 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 FMO3P31513 532 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 VARS2Q5ST30 1063 aaKnown RBP11.37□□□□□ -0.59
PTCH1-203ENST00000375274 SERPINA13PQ6UXR4 307 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 MCMBPQ9BTE3 642 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 RMI1Q9H9A7 625 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 TMEM9Q9P0T7 183 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 MYH7BA7E2Y1 1941 aa11.37□□□□□ -0.59
PTCH1-203ENST00000375274 PARP4Q9UKK3 1724 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 C9IYK1 514 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 OAS1P00973 400 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 RPLP0P05388 317 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 SLC35G4P0C7Q5 338 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 NOVP48745 357 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 GJA9P57773 515 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 NPTX1Q15818 432 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 DCST1Q5T197 706 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 TXNDC5Q8NBS9 432 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 EEF1AKMT1Q8WVE0 214 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 GTPBP3Q969Y2 492 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 FUBP3Q96I24 572 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 SEMA3GQ9NS98 782 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 DNAAF2Q9NVR5 837 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 MTRRQ9UBK8 725 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 ANKRD12Q6UB98 2062 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 IRGMA1A4Y4 181 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 CLIC3O95833 236 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 CYP11A1P05108 521 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 GNAZP19086 355 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 NSG1P42857 185 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 TAS2R41P59536 307 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF829Q3KNS6 432 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 TMEM74Q96NL1 305 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 FAM83DQ9H4H8 585 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 THG1LQ9NWX6 298 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 GDAP2Q9NXN4 497 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 RUVBL1Q9Y265 456 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 TLR6Q9Y2C9 796 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 TELO2Q9Y4R8 837 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 MYH7P12883 1935 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 OR2AG2A6NM03 316 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 MPZL2O60487 215 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 ATG13O75143 517 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 SNX4O95219 450 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 VARSP26640 1264 aaKnown RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 CCL23P55773 120 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 BIKQ13323 160 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 IFI44LQ53G44 452 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 SIRPB2Q5JXA9 342 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 CRYGNQ8WXF5 182 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 TMEM39AQ9NV64 488 aa11.36□□□□□ -0.59
PTCH1-203ENST00000375274 POLR3BQ9NW08 1133 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-203ENST00000375274 BHMG1C9JSJ3 638 aaPredicted RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 SLC30A4O14863 429 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 NUDT14O95848 222 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 TBX18O95935 607 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 TIE1P35590 1138 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 GGT5P36269 586 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 ENTPD1P49961 510 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 PSMD4P55036 377 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 MXD1Q05195 221 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 ZNF33AQ06730 810 aa11.35□□□□□ -0.59
PTCH1-203ENST00000375274 SKIV2LQ15477 1246 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 PDCD4Q53EL6 469 aaKnown RBP11.35□□□□□ -0.59
PTCH1-203ENST00000375274 C9orf64Q5T6V5 341 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms