RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 LIN7AO14910 233 aaPredicted RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 ZNF821O75541 412 aaPredicted RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 VAMP5O95183 116 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 NOGQ13253 232 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 PXDC1Q5TGL8 231 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 SLC25A25Q6KCM7 469 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 LINC00696Q6ZRV3 163 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 OR52N1Q8NH53 320 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 C3orf49Q96BT1 292 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 C12orf66Q96MD2 445 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 UBAC1Q9BSL1 405 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 ADAM28Q9UKQ2 775 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 ANK1P16157 1881 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 STK36Q9NRP7 1315 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 MTMR11A4FU01 709 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 SLC9A3R1O14745 358 aaPredicted RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 SERPING1P05155 500 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 HOXD8P13378 290 aaPredicted RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 EPHA4P54764 986 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 ADAM9Q13443 819 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 KIZQ2M2Z5 673 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 CT83Q5H943 113 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 IL20RBQ6UXL0 311 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 CLEC9AQ6UXN8 241 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 CHST9Q7L1S5 443 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 KDM8Q8N371 416 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 PHYHIPQ92561 330 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 CORO2AQ92828 525 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 CMTM5Q96DZ9 223 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 RNF31Q96EP0 1072 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 FAM71F1Q96KD3 344 aaPredicted RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 CCNL2Q96S94 520 aaPredicted RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 PAPOLGQ9BWT3 736 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 ANO3Q9BYT9 981 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 LRMDAQ9H2I8 198 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 MTIF3Q9H2K0 278 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 PABPC3Q9H361 631 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 PANK4Q9NVE7 773 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 DNAJC17Q9NVM6 304 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 GPN3Q9UHW5 284 aaPredicted RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 PLXNA1Q9UIW2 1896 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 ZNF98A6NK75 572 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 CCNT2O60583 730 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 ONECUT2O95948 504 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 CD44P16070 742 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 CYP3A5P20815 502 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 RAP1GAPP47736 663 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 TUBB2AQ13885 445 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 PUM1Q14671 1186 aaKnown RBP eCLIP8.88□□□□□ -0.99
UBR4-201ENST00000375218 KRT79Q5XKE5 535 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 ADAMTSL2Q86TH1 951 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 OR2T3Q8NH03 318 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 NELFBQ8WX92 580 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 GPKOWQ92917 476 aaPredicted RBP eCLIP8.88□□□□□ -0.991e-17■□□□□ 9.5
UBR4-201ENST00000375218 LENG9Q96B70 501 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 TAMM41Q96BW9 452 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 ZNF597Q96LX8 424 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 MBOAT7Q96N66 472 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 C7orf50Q9BRJ6 194 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 TUBB2BQ9BVA1 445 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 SMURF2Q9HAU4 748 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 CYP8B1Q9UNU6 501 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 LIPT1Q9Y234 373 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 DTX4Q9Y2E6 619 aa8.88□□□□□ -0.99
UBR4-201ENST00000375218 RBMX2Q9Y388 322 aaKnown RBP8.88□□□□□ -0.99
UBR4-201ENST00000375218 PRAMEF2O60811 474 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 B4GALT2O60909 372 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 GNSP15586 552 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 TXKP42681 527 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 CDKN2CP42773 168 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 SLC11A2P49281 568 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 MAP2K6P52564 334 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 HNRNPFP52597 415 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 CDH8P55286 799 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 BOP1Q14137 746 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 RGS21Q2M5E4 152 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 INTS6LQ5JSJ4 861 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 KRT80Q6KB66 452 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 GSPT2Q8IYD1 628 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 DTD2Q96FN9 168 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 ZNF317Q96PQ6 595 aaPredicted RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 NEU1Q99519 415 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 MGME1Q9BQP7 344 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 SRSF8Q9BRL6 282 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 IDI2Q9BXS1 227 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 LHX5Q9H2C1 402 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 NT5MQ9NPB1 228 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 UFSP2Q9NUQ7 469 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 SYBUQ9NX95 663 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 HSFX1Q9UBD0 423 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 RHBDD3Q9Y3P4 386 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 PRR23D1E9PI22 279 aaPredicted RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 PRR23D2P0DMB1 279 aaPredicted RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 OXTRP30559 389 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 ANXA11P50995 505 aaKnown RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 HK2P52789 917 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 AGERQ15109 404 aa8.87□□□□□ -0.99
UBR4-201ENST00000375218 TRIP4Q15650 581 aaPredicted RBP8.87□□□□□ -0.99
UBR4-201ENST00000375218 NTRK2Q16620 822 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms