RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 HTATIP2Q9BUP3 242 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 ACTL8Q9H568 366 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 SPATS2LQ9NUQ6 558 aaKnown RBP15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 SLC25A13Q9UJS0 675 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 TMPRSS11EQ9UL52 423 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 HS3ST2Q9Y278 367 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 PCDHA9Q9Y5H5 950 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 TNPO3Q9Y5L0 923 aaKnown RBP15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 NOTCH4Q99466 2003 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 ZFC3H1O60293 1989 aaKnown RBP15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 A0A1B0GTW7 788 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 LOC730098B7Z3J9 87 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 ARPC2O15144 300 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 MOSPD3O75425 235 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 PABPC1P11940 636 aaKnown RBP15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 SLC7A1P30825 629 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 AKT1P31749 480 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 CSNK1DP48730 415 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 GSK3BP49841 420 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 LIPEQ05469 1076 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 CARD16Q5EG05 197 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 TMEM199Q8N511 208 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 PIP4K2CQ8TBX8 421 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 BRINP2Q9C0B6 783 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 ALG2Q9H553 416 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 PDP2Q9P2J9 529 aa15.69■□□□□ 0.1
CNKSR1-202ENST00000374253 PDLIM1O00151 329 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 GRM6O15303 877 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 INPP4BO15327 924 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 OTCP00480 354 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 MTPNP58546 118 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 SELPLGQ14242 412 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 CRY1Q16526 586 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 CPSF6Q16630 551 aaKnown RBP eCLIP15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 TBCELQ5QJ74 424 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 CYP20A1Q6UW02 462 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 MACC1Q6ZN28 852 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 EFL1Q7Z2Z2 1120 aaKnown RBP15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 SPATA16Q9BXB7 569 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 CD244Q9BZW8 370 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 CROCCQ5TZA2 2017 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 TTC34A8MYJ7 566 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 RHOP08100 348 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 CTNNB1P35222 781 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 IRS1P35568 1242 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 NSG1P42857 185 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 NANOGP8Q6NSW7 305 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 DNAJC14Q6Y2X3 702 aaPredicted RBP15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 ECHDC3Q96DC8 303 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 NANOGQ9H9S0 305 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 TDP1Q9NUW8 608 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 ARL15Q9NXU5 204 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 ST14Q9Y5Y6 855 aa15.68■□□□□ 0.1
CNKSR1-202ENST00000374253 DHRS12A0PJE2 317 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 PER2O15055 1255 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 EEDO75530 441 aaKnown RBP15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 ATP6V1B1P15313 513 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 EPCAMP16422 314 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 ZXDCQ2QGD7 858 aaPredicted RBP15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 GPR33Q49SQ1 333 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 ADIPOR2Q86V24 386 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 ST13P4Q8IZP2 240 aaPredicted RBP15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 OR2A12Q8NGT7 310 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 IRF7Q92985 503 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 KCTD14Q9BQ13 255 aaPredicted RBP15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 ZDHHC3Q9NYG2 299 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 RPIAP49247 311 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 NEK2P51955 445 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 CREMQ03060 361 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 PRKG2Q13237 762 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 PDCD4Q53EL6 469 aaKnown RBP15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 Q6ZVL8 140 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 POF1BQ8WVV4 589 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 FOXJ1Q92949 421 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 ULK4Q96C45 1275 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 LEF1Q9UJU2 399 aaPredicted RBP15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 ZNF490Q9ULM2 529 aaPredicted RBP15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 TMCO1Q9UM00 188 aa15.67■□□□□ 0.1
CNKSR1-202ENST00000374253 FAM234BA2RU67 622 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 OR2AG2A6NM03 316 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 SOCS2O14508 198 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 DENRO43583 198 aaKnown RBP15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 LEFTY1O75610 366 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 POP4O95707 220 aaKnown RBP15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 ETV3P41162 512 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 CYP51A1Q16850 503 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 PRMT9Q6P2P2 845 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 HSD11B1LQ7Z5J1 315 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 SATL1Q86VE3 508 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 ZFAND4Q86XD8 727 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 KRTCAP2Q8N6L1 136 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 CATSPER1Q8NEC5 780 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 LYSMD1Q96S90 227 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 SPHK2Q9NRA0 654 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 PDE10AQ9Y233 779 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 PLXNB3Q9ULL4 1909 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 K7EPI3 171 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 OR6B1O95007 311 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 HSD17B1P14061 328 aa15.66■□□□□ 0.1
CNKSR1-202ENST00000374253 SPINT3P49223 89 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms