RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 LENG8Q96PV6 779 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 SHCBP1LQ9BZQ2 653 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 SCUBE2Q9NQ36 999 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 MRGBPQ9NV56 204 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 MARCH4Q9P2E8 410 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ADAMTS6Q9UKP5 1117 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 CYP8B1Q9UNU6 501 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ARL5AQ9Y689 179 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ABCA7Q8IZY2 2146 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 hCG_2014768A0A024R1R8 64 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 CD3EAPO15446 510 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 POP4O95707 220 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 DNTTP04053 509 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ACADMP11310 421 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 TDGF1P13385 188 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 PEX2P28328 305 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 NR1H2P55055 460 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 FOLH1Q04609 750 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 GALNT1Q10472 559 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 CCNIQ14094 377 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 GALNT3Q14435 633 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 HERC3Q15034 1050 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 PTPRRQ15256 657 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ZNF776Q68DI1 518 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ERI1Q8IV48 349 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 FBXW8Q8N3Y1 598 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 DEFB119Q8N690 84 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 BLOC1S5Q8TDH9 187 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 ABTB1Q969K4 478 aaPredicted RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 VPS50Q96JG6 964 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 MAELQ96JY0 434 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 TBATAQ96M53 351 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 KLHL32Q96NJ5 620 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 SMIM14Q96QK8 99 aa14.06□□□□□ -0.16
HMGA1-203ENST00000374116 UNKQ9C0B0 810 aaKnown RBP14.06□□□□□ -0.16
HMGA1-203ENST00000374116 A8MT66 165 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 AXIN1O15169 862 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 RNASEH2AO75792 299 aaKnown RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 PGM3O95394 542 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 GOT2P00505 430 aaKnown RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 SP9P0CG40 484 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 OGNP20774 298 aaKnown RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 FDXRP22570 491 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 SLC5A2P31639 672 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 DRD3P35462 400 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 TPMTP51580 245 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 CDKN2DP55273 166 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 C16orf89Q6UX73 402 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 MAMSTRQ6ZN01 415 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 PATL1Q86TB9 770 aaKnown RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 METTL3Q86U44 580 aaKnown RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 ZSWIM9Q86XI8 627 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 CAMKK1Q8N5S9 505 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 IER2Q9BTL4 223 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 TDRD1Q9BXT4 1180 aaKnown RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 PLGRKTQ9HBL7 147 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 POPDC3Q9HBV1 291 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 INIPQ9NRY2 104 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 FBXL12Q9NXK8 326 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 C6orf203Q9P0P8 240 aaPredicted RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 PRPF19Q9UMS4 504 aaKnown RBP14.05□□□□□ -0.16
HMGA1-203ENST00000374116 DOCK9Q9BZ29 2069 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 BPTFQ12830 3046 aa14.05□□□□□ -0.16
HMGA1-203ENST00000374116 A0A0U1RQS6 177 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CXorf51AA0A1B0GTR3 108 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 PRR23AA6NEV1 266 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 OR51F1A6NGY5 319 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CCL22O00626 93 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CRTAMO95727 393 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 ZNF140P52738 457 aaPredicted RBP14.04□□□□□ -0.16
HMGA1-203ENST00000374116 EPHB1P54762 984 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CNTN1Q12860 1018 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 TRAF2Q12933 501 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 LPCAT4Q643R3 524 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 NXNQ6DKJ4 435 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 NCEH1Q6PIU2 408 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 GDPD4Q6W3E5 623 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 LDB1Q86U70 411 aaPredicted RBP14.04□□□□□ -0.16
HMGA1-203ENST00000374116 HDDC3Q8N4P3 179 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 PAF1Q8N7H5 531 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 KYQ8NBH2 561 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CATSPER1Q8NEC5 780 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 ANKRD49Q8WVL7 239 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 PPP1R36Q96LQ0 422 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 TRMOQ9BU70 441 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 RMI1Q9H9A7 625 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CATSPERZQ9NTU4 200 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 DTNAQ9Y4J8 743 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 SPO11Q9Y5K1 396 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 AK5Q9Y6K8 562 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 DNAH14Q0VDD8 3507 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 GON4LQ3T8J9 2241 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 CCDC162PA2VCL2 907 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 NEMP2A6NFY4 417 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 A8MX80 341 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 SUPT3HO75486 399 aa14.04□□□□□ -0.16
HMGA1-203ENST00000374116 PDE5AO76074 875 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms