RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 FARSBQ9NSD9 589 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 PCDHGA11Q9Y5H2 935 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 DGKBQ9Y6T7 804 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 SP2Q02086 613 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 C6orf52Q5T4I8 152 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 COX18Q8N8Q8 333 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 HERVK_113Q902F9 699 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 PRICKLE1Q96MT3 831 aaPredicted RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 RGS17Q9UGC6 210 aaPredicted RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 RUVBL1Q9Y265 456 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 PRAMEF12O95522 483 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 PTPN2P17706 415 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 S100A1P23297 94 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 ECHS1P30084 290 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 CLCN7P51798 805 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 TAF1AQ15573 450 aaPredicted RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 SLC1A5Q15758 541 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 ARL13AQ5H913 290 aaPredicted RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 GOLGA2P5Q9HBQ8 144 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 C11orf16Q9NQ32 467 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 A0A075B6Q4 140 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 CPSF4LA6NMK7 179 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 CXCR6O00574 342 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 C4BPAP04003 597 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 HSD17B2P37059 387 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 CDKN2BP42772 138 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 ADAM8P78325 824 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 RUNDC3AQ59EK9 446 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 ZCCHC10Q8TBK6 192 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 FCGR1BQ92637 280 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 ZSWIM3Q96MP5 696 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 SLC38A3Q99624 504 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 C1orf109Q9NX04 203 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 BAIAP2Q9UQB8 552 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 IQCF5A8MTL0 148 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 GADD45GO95257 159 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 RLN2P04090 185 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 NR4A1P22736 598 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 CPN2P22792 545 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 RYKP34925 604 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 TAS2R50P59544 299 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 GBE1Q04446 702 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 FSTL1Q12841 308 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 PYHIN1Q6K0P9 492 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 LINGO4Q6UY18 593 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 IFT27Q9BW83 186 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 INTS10Q9NVR2 710 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 THUMPD1Q9NXG2 353 aaKnown RBP11.38□□□□□ -0.59
VCL-202ENST00000372755 GTF2IRD1Q9UHL9 959 aa11.38□□□□□ -0.59
VCL-202ENST00000372755 ABCA9Q8IUA7 1624 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 ORC5O43913 435 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 EIF5AP63241 154 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 MC1RQ01726 317 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 SLITRK4Q8IW52 837 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 ANKFN1Q8N957 763 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 TP53INP1Q96A56 240 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 HMCESQ96FZ2 354 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 HNRNPABQ99729 332 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 PDZD7Q9H5P4 517 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 PPRC1Q5VV67 1664 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 ALPPP05187 535 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 RPLP0P05388 317 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 SEPHS1P49903 392 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 PPIGQ13427 754 aaKnown RBP eCLIP11.37□□□□□ -0.59
VCL-202ENST00000372755 DPY19L1Q2PZI1 675 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 TMEM220Q6QAJ8 160 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 CBR4Q8N4T8 237 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 ZBED6CLQ96FA7 236 aaPredicted RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 C8orf48Q96LL4 319 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 RIPOR3Q96MK2 946 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 IL12RB2Q99665 862 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 RC3H2Q9HBD1 1191 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 POLMQ9NP87 494 aaPredicted RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 TESMINQ9Y4I5 508 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 DCCP43146 1447 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 OR4F21O95013 312 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 FLT3LGP49771 235 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 MAPK14Q16539 360 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 FAM110CQ1W6H9 321 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 UBAP2Q5T6F2 1119 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 FRMD7Q6ZUT3 714 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 OR10H4Q8NGA5 316 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 EBPLQ9BY08 206 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 DPEP2Q9H4A9 486 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 ZNF639Q9UID6 485 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 PADI3Q9ULW8 664 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 PDE10AQ9Y233 779 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 R3HDM2Q9Y2K5 976 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 FKBP7Q9Y680 259 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 E7ENX8 843 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 NSG1P42857 185 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 CEBPGP53567 150 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 SLC13A2Q13183 592 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 PPM1JQ5JR12 505 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 PLCZ1Q86YW0 608 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 ZNF615Q8N8J6 731 aa11.37□□□□□ -0.59
VCL-202ENST00000372755 SIDT2Q8NBJ9 832 aaKnown RBP11.37□□□□□ -0.59
VCL-202ENST00000372755 SPOCK2Q92563 424 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms