RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 PCCBP05166 539 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 PRR23D2P0DMB1 279 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 SPAM1P38567 509 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 CTSKP43235 329 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 RPS9P46781 194 aaKnown RBP8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 PREPP48147 710 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 AIF1P55008 147 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 ROR2Q01974 943 aaKnown RBP8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 C18orf21Q32NC0 220 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 BROXQ5VW32 411 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 ZNF57Q68EA5 555 aaPredicted RBP8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 MSANTD2Q6P1R3 559 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 SUSD1Q6UWL2 747 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 NPAS4Q8IUM7 802 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 ASZ1Q8WWH4 475 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 KHSRPQ92945 711 aaKnown RBP eCLIP8.97□□□□□ -0.972e-7■■■□□ 15.2
SMARCA1-202ENST00000371122 PPCDCQ96CD2 204 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 ZHX1-C8orf76Q96EF9 292 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 MAGEH1Q9H213 219 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 CRISPLD1Q9H336 500 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 CXorf21Q9HAI6 301 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 DEC1Q9P2X7 70 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 CABIN1Q9Y6J0 2220 aa8.97□□□□□ -0.97
SMARCA1-202ENST00000371122 CPSF4LA6NMK7 179 aaKnown RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 GNB5O14775 395 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 SUV39H1O43463 412 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CA12O43570 354 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 IFNA14P01570 189 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 RPLP2P05387 115 aaKnown RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 G6PDP11413 515 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 COL6A2P12110 1019 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 FMO3P31513 532 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 INO80DQ53TQ3 878 aaPredicted RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 C9orf64Q5T6V5 341 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 Q6ZVL8 140 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CYP4Z1Q86W10 505 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 SLC34A3Q8N130 599 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 OR14C36Q8NHC7 312 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 WDR36Q8NI36 951 aaKnown RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 FBXL20Q96IG2 436 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 ADI1Q9BV57 179 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 SLCO3A1Q9UIG8 710 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CEP250Q9BV73 2442 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 COL2A1P02458 1487 aaPredicted RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 EFCAB10A6NFE3 127 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 LOC730098B7Z3J9 87 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 J3QRK9 145 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 RSL1D1O76021 490 aaKnown RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 PRKD3O94806 890 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CLDN9O95484 217 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CHRNA1P02708 482 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 SLC35G4P0C7Q5 338 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CCNA2P20248 432 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CAPZA2P47755 286 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 RNF144AP50876 292 aaPredicted RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 PTPN5P54829 565 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CDH4P55283 916 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CDH12P55289 794 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 GALNT2Q10471 571 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 GRB14Q14449 540 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 SPANXN2Q5MJ10 180 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 ADGRF1Q5T601 910 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 OR4F3Q6IEY1 312 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 KIAA0408Q6ZU52 694 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CCDC149Q6ZUS6 474 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 FAM129CQ86XR2 697 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 ADCY4Q8NFM4 1077 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 DENND1AQ8TEH3 1009 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CENPIQ92674 756 aaPredicted RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 CLP1Q92989 425 aaKnown RBP8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 NTAN1Q96AB6 310 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 FBXL8Q96CD0 374 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 ANKRD27Q96NW4 1050 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 GDAP2Q9NXN4 497 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 KLHL28Q9NXS3 571 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 FLRT1Q9NZU1 646 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 FBXW2Q9UKT8 454 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 ENTPD4Q9Y227 616 aa8.96□□□□□ -0.97
SMARCA1-202ENST00000371122 C2orf78A6NCI8 922 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 ANKRD66B4E2M5 251 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 MYL12BO14950 172 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 NDUFB5O43674 189 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 SERPINA1P01009 418 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 PAICSP22234 425 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 SOX6P35712 828 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 ATP12AP54707 1039 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 C1DQ13901 141 aaKnown RBP8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 HKDC1Q2TB90 917 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 NADK2Q4G0N4 442 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 ARSIQ5FYB1 569 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 SPANXN4Q5MJ08 99 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 ATAD3BQ5T9A4 648 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 XKR5Q6UX68 686 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 ATG14Q6ZNE5 492 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 FAM9CQ8IZT9 166 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 SMYD1Q8NB12 490 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 KREMEN2Q8NCW0 462 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 ZCCHC10Q8TBK6 192 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 IRGQQ8WZA9 623 aa8.96□□□□□ -0.98
SMARCA1-202ENST00000371122 SLC9A6Q92581 669 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms