RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 POLR1EQ9GZS1 481 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 EPB41L1Q9H4G0 881 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MTG2Q9H4K7 406 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 BRD9Q9H8M2 597 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 LRRC40Q9H9A6 602 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 RIC8BQ9NVN3 520 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ARGLU1Q9NWB6 273 aaPredicted RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 ELOVL2Q9NXB9 296 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 DEC1Q9P2X7 70 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MTRF1LQ9UGC7 380 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 SCOCQ9UIL1 159 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 HS3ST2Q9Y278 367 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TEX264Q9Y6I9 313 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CXorf51AA0A1B0GTR3 108 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 LOC285095A0A1B0GVY8 99 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 SHISA7A6NL88 538 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ERI2A8K979 691 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 ACOT7O00154 380 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 NDC80O14777 642 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 FFAR3O14843 346 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 NARSO43776 548 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 NEBLO76041 1014 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 KAT7O95251 611 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TTC4O95801 387 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 SHBGP04278 402 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PDHA1P08559 390 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ATXN1LP0C7T5 689 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 MLNP12872 115 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 IL9P15248 144 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 POLR2EP19388 210 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 CTSSP25774 331 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MGAT1P26572 445 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CSNK1DP48730 415 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 SESN2P58004 480 aaPredicted RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 RHOAP61586 193 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 SULT2A1Q06520 285 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TRAF2Q12933 501 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MPP3Q13368 585 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CASP8Q14790 479 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MYLK3Q32MK0 819 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 LIN54Q6MZP7 749 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PGBD2Q6P3X8 592 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 MICALCLQ6ZW33 695 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CENPUQ71F23 418 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 STK32CQ86UX6 486 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ZBED8Q8IZ13 594 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PDIK1LQ8N165 341 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 FBXO36Q8NEA4 188 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 OR6K2Q8NGY2 324 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 WFIKKN2Q8TEU8 576 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 ISG20Q96AZ6 181 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 RGMAQ96B86 450 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PEX11GQ96HA9 241 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 KCNC2Q96PR1 638 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 TM6SF2Q9BZW4 377 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CIPCQ9C0C6 399 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 PABPC3Q9H361 631 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 CDC42EP4Q9H3Q1 356 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 XAB2Q9HCS7 855 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 SYBUQ9NX95 663 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.55□□□□□ -1.84
MCF2-202ENST00000370573 PADI4Q9UM07 663 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CHMP2BQ9UQN3 213 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 CHKBQ9Y259 395 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 AAR2Q9Y312 384 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 NFS1Q9Y697 457 aa3.55□□□□□ -1.84
MCF2-202ENST00000370573 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.55□□□□□ -1.84
MCF2-202ENST00000370573 COL6A3P12111 3177 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 TICRRQ7Z2Z1 1910 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 A0A1W2PPC4 97 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 TBC1D3BA6NDS4 549 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 SDR42E2A6NKP2 422 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 LOC730098B7Z3J9 87 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 WASH3PC4AMC7 463 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 SPECC1L-ADORA2AF8WAN1 911 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 K7EQS6 105 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 AGPSO00116 658 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 TRIM38O00635 465 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 TRAFD1O14545 582 aaPredicted RBP3.54□□□□□ -1.84
MCF2-202ENST00000370573 EIF3HO15372 352 aaKnown RBP eCLIP3.54□□□□□ -1.84
MCF2-202ENST00000370573 RIPK2O43353 540 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 FRS3O43559 492 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 ACSL3O95573 720 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 GSRP00390 522 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 C1QAP02745 245 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 SERPINF2P08697 491 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 DLDP09622 509 aaKnown RBP3.54□□□□□ -1.84
MCF2-202ENST00000370573 HLA-EP13747 358 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 SSTR1P30872 391 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 NPY2RP49146 381 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 ALDH9A1P49189 494 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 NKX6-1P78426 367 aaPredicted RBP3.54□□□□□ -1.84
MCF2-202ENST00000370573 SARNPP82979 210 aaKnown RBP3.54□□□□□ -1.84
MCF2-202ENST00000370573 CDK18Q07002 472 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 DAG1Q14118 895 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 SLC29A2Q14542 456 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 SLMAPQ14BN4 828 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 SLC1A5Q15758 541 aa3.54□□□□□ -1.84
MCF2-202ENST00000370573 ACCSLQ4AC99 568 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms