RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 UGT8Q16880 541 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.68□□□□□ -1.02
TPM3-213ENST00000368545 FUT11Q495W5 492 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 C22orf34Q6ZV56 151 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 GLT6D1Q7Z4J2 308 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 ZNF605Q86T29 641 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 TAX1BP1Q86VP1 789 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 OR2AP1Q8NGE2 309 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 OR13J1Q8NGT2 312 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 BLOC1S5Q8TDH9 187 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 CKAP2Q8WWK9 683 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 FGF13Q92913 245 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 FAM46AQ96IP4 442 aaKnown RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 ZC3H10Q96K80 434 aaKnown RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 MAGEB18Q96M61 343 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 TUBGCP5Q96RT8 1024 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 AGAP2Q99490 1192 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 RHOJQ9H4E5 214 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 AKTIPQ9H8T0 292 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 HACD3Q9P035 362 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 RPL26L1Q9UNX3 145 aaKnown RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 CHKBQ9Y259 395 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 KIAA1549LQ6ZVL6 1849 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 CHD6Q8TD26 2715 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 CCDC78A2IDD5 438 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 HMX2A2RU54 273 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 PRRT4C9JH25 899 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 GOLGA8RI6L899 631 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 GSRP00390 522 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 LPLP06858 475 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 SRCP12931 536 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 ECT2LQ008S8 904 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 BCL2L1Q07817 233 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 TRAF2Q12933 501 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 HHATQ5VTY9 493 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 C22orf39Q6P5X5 142 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 GET4Q7L5D6 327 aaPredicted RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 PCDH20Q8N6Y1 951 aaKnown RBP8.68□□□□□ -1.02
TPM3-213ENST00000368545 LPCAT1Q8NF37 534 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 PIP4K2CQ8TBX8 421 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 TCP10LQ8TDR4 215 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 WFIKKN2Q8TEU8 576 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 CCT6BQ92526 530 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 WBP1Q96G27 269 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 C19orf43Q9BQ61 176 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 SCNM1Q9BWG6 230 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 TM6SF2Q9BZW4 377 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 LINC00597Q9H2U6 94 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 ATP13A3Q9H7F0 1226 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 SLC17A6Q9P2U8 582 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 SLC2A6Q9UGQ3 507 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 FBXO10Q9UK96 956 aa8.68□□□□□ -1.02
TPM3-213ENST00000368545 CDH23Q9H251 3354 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 ZNF106Q9H2Y7 1883 aaKnown RBP8.67□□□□□ -1.02
TPM3-213ENST00000368545 EYSQ5T1H1 3165 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 C2orf81A6NN90 581 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 ANKRD66B4E2M5 251 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 NDUFAB1O14561 156 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 GLRA3O75311 464 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 RPP40O75818 363 aaKnown RBP8.67□□□□□ -1.02
TPM3-213ENST00000368545 PRLP01236 227 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 ALDOAP04075 364 aaKnown RBP8.67□□□□□ -1.02
TPM3-213ENST00000368545 HTR1BP28222 390 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 SERPINA4P29622 427 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 MAGEA12P43365 314 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 INSCQ1MX18 579 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 FAM78AQ5JUQ0 283 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 ATXN7L2Q5T6C5 722 aaPredicted RBP8.67□□□□□ -1.02
TPM3-213ENST00000368545 ARMC12Q5T9G4 340 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 ZNF470Q6ECI4 717 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 NEPROQ6NW34 567 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 RGS9BPQ6ZS82 235 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 ZC3HC1Q86WB0 502 aaKnown RBP8.67□□□□□ -1.02
TPM3-213ENST00000368545 NDUFAF2Q8N183 169 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 KRT78Q8N1N4 520 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 GDAP1Q8TB36 358 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 GAB3Q8WWW8 586 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 VPS39Q96JC1 886 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 KLF6Q99612 283 aaPredicted RBP8.67□□□□□ -1.02
TPM3-213ENST00000368545 GPR22Q99680 433 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 CLMPQ9H6B4 373 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 PCMTD2Q9NV79 361 aa8.67□□□□□ -1.02
TPM3-213ENST00000368545 USP36Q9P275 1121 aaKnown RBP8.67□□□□□ -1.02
TPM3-213ENST00000368545 SCN8AQ9UQD0 1980 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 FAM95CA0A1B0GW59 222 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 A0A1W2PQ67 120 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 K7ERQ8 282 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 TERTO14746 1132 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 HTRA2O43464 458 aaPredicted RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 SMAD6O43541 496 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 PGLSO95336 258 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 AGR2O95994 175 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 MPOP05164 745 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 GSTA1P08263 222 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 POLR2EP19388 210 aaKnown RBP8.66□□□□□ -1.02
TPM3-213ENST00000368545 PSMA3P25788 255 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 TYK2P29597 1187 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 CRHR1P34998 444 aa8.66□□□□□ -1.02
TPM3-213ENST00000368545 SLC1A2P43004 574 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms