RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 ACP5P13686 325 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 VEGFBP49765 207 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 STK19P49842 368 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 DPYSQ14117 519 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 TRIM25Q14258 630 aaKnown RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 ACSBG2Q5FVE4 666 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 CDHR3Q6ZTQ4 885 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 CYP2U1Q7Z449 544 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 CCDC103Q8IW40 242 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 OR8H2Q8N162 312 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 UMODL1-AS1Q8N2C9 162 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 PARP8Q8N3A8 854 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 SYT11Q9BT88 431 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 AKTIPQ9H8T0 292 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 ARHGEF3Q9NR81 526 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 GLI3P10071 1580 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 FAM47E-STBD1D6RA91 191 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 TEX28O15482 410 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 IL6P05231 212 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 UQCRBP14927 111 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 PEX2P28328 305 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 PRDX6P30041 224 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 MAPK11Q15759 364 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 BRAT1Q6PJG6 821 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 ZCCHC7Q8N3Z6 543 aaKnown RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 CELF5Q8N6W0 485 aaKnown RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 C12orf76Q8N812 135 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 LEMD2Q8NC56 503 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 NUS1Q96E22 293 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 ZNF607Q96SK3 696 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 TDRD1Q9BXT4 1180 aaKnown RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 B4GALT6Q9UBX8 382 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 SLC7A8Q9UHI5 535 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 LRRC72A6NJI9 287 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 AP3D1O14617 1153 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 TYROBPO43914 113 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 MTHFRP42898 656 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 RING1Q06587 406 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 CYP4F3Q08477 520 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 SIM2Q14190 667 aaPredicted RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 PCLAFQ15004 111 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 Q6ZVL8 140 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 FAM20CQ8IXL6 584 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 AHI1Q8N157 1196 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 LMLNQ96KR4 655 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 FNDC11Q9BVV2 318 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 SAMD4AQ9UPU9 718 aaKnown RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 CFAP20Q9Y6A4 193 aaKnown RBP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 MYO7AQ13402 2215 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 G3V2T6 193 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.11□□□□□ -0.47
PTPRK-203ENST00000368207 RNF44Q7L0R7 432 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 FAM129CQ86XR2 697 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 PHTF2Q8N3S3 785 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 SLC43A3Q8NBI5 491 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 ADCY4Q8NFM4 1077 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 SLC13A3Q8WWT9 602 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 MRGPRX2Q96LB1 330 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 SLC39A3Q9BRY0 314 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 C3orf14Q9HBI5 128 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 RAPGEFL1Q9UHV5 662 aa12.11□□□□□ -0.47
PTPRK-203ENST00000368207 E7ESA3 106 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 MAFKO60675 156 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 OAZ2O95190 189 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ALDOAP04075 364 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 PRPS2P11908 318 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 INAQ16352 499 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 USP39Q53GS9 565 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 CLLU1OSQ5K130 101 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 OR9I1Q8NGQ6 314 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 LRTOMTQ8WZ04 291 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 RNFT2Q96EX2 444 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 PSKH2Q96QS6 385 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ELAC1Q9H777 363 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 PNPLA3Q9NST1 481 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 FBXW2Q9UKT8 454 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 SLC22A14Q9Y267 594 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 STX16-NPEPL1H3BU86 382 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 AXIN1O15169 862 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 MMP20O60882 483 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 STC2O76061 302 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 NFKB2Q00653 900 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 BROXQ5VW32 411 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 CBR4Q8N4T8 237 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ZCCHC10Q8TBK6 192 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 CENPIQ92674 756 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 MOCOSQ96EN8 888 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 IMP4Q96G21 291 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 NSUN3Q9H649 340 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 SEC14L3Q9UDX4 400 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 GIMAP2Q9UG22 337 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 N6AMT1Q9Y5N5 214 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 COLEC10Q9Y6Z7 277 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 MYO18AQ92614 2054 aaKnown RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 PI15O43692 258 aa12.1□□□□□ -0.47
PTPRK-203ENST00000368207 ZBTB11O95625 1053 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-203ENST00000368207 EPOP01588 193 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms