RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 PRRC2CQ9Y520 2896 aaKnown RBP11.09□□□□□ -0.63
CSNK1E-202ENST00000366216 LRP4O75096 1905 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 EDDM13A0A1B0GTR0 161 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 NEMP2A6NFY4 417 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 PRAMEF26H0Y7S4 382 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 KLF11O14901 512 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 BUD23O43709 281 aaKnown RBP11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 NOBOXO60393 691 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 PLIN3O60664 434 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 STMN1P16949 149 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 GKP32189 559 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 RAB10P61026 200 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 TMPRSS15P98073 1019 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 PTPRCAPQ14761 206 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 CDKN3Q16667 212 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 ZSCAN26Q16670 478 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 POM121L1PQ3SYA9 428 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 CCDC153Q494R4 210 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 SETMARQ53H47 684 aaPredicted RBP11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 FASTKD1Q53R41 847 aaKnown RBP11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 CNSTQ6PJW8 725 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 DPY19L3Q6ZPD9 716 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 PIGWQ7Z7B1 504 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 TRIM69Q86WT6 500 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 FAM26EQ8N5C1 309 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 OTUD6BQ8N6M0 293 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 ACVR1CQ8NER5 493 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 OR2A12Q8NGT7 310 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 RAB3IL1Q8TBN0 382 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 HCAR2Q8TDS4 363 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 SCRN2Q96FV2 425 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 TSPAN17Q96FV3 270 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 SMIM14Q96QK8 99 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 HEPHQ9BQS7 1158 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 DUSP23Q9BVJ7 150 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 OSBPL1AQ9BXW6 950 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 GPR63Q9BZJ6 419 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 C12orf65Q9H3J6 166 aaKnown RBP11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 RABEP2Q9H5N1 569 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 SUDS3Q9H7L9 328 aaPredicted RBP11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 FBXO6Q9NRD1 293 aaPredicted RBP11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 SIRPGQ9P1W8 387 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 MARCH4Q9P2E8 410 aaPredicted RBP11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 TLK1Q9UKI8 766 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 EMCNQ9ULC0 261 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 PKP3Q9Y446 797 aa11.08□□□□□ -0.64
CSNK1E-202ENST00000366216 A0A087X1B8 175 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 CCDC187A0A096LP49 1063 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 TSPAN11A1L157 253 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 BLACEA4D250 179 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 OR51F1A6NGY5 319 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 K7ESM1 405 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 CCL22O00626 93 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 SCAMP1O15126 338 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 PFDN6O15212 129 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 IL1BP01584 269 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 PROCP04070 461 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 APOA4P06727 396 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 BPGMP07738 259 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 F7P08709 466 aaPredicted RBP11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 SLC35E2BP0CK96 405 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 CTPS1P17812 591 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 CCR10P46092 362 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 STC1P52823 247 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 SLC12A2P55011 1212 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 TAS2R38P59533 333 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 TAS2R39P59534 338 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 POLR2LP62875 67 aaKnown RBP11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 DMTNQ08495 405 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 TBR1Q16650 682 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ZNF789Q5FWF6 425 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 AARS2Q5JTZ9 985 aaKnown RBP11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 RNF187Q5TA31 235 aaPredicted RBP11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 GKAP1Q5VSY0 366 aaPredicted RBP11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 FAM45BPQ6NSW5 357 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 BRAT1Q6PJG6 821 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 GDPD4Q6W3E5 623 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 Q6ZVU0 165 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 RAPH1Q70E73 1250 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 USP45Q70EL2 814 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ZSWIM9Q86XI8 627 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 CBARPQ8N350 705 aaPredicted RBP11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 GPATCH11Q8N954 259 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 TMEM145Q8NBT3 493 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ARMC2Q8NEN0 867 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 FAM45AQ8TCE6 357 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ARRDC3Q96B67 414 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ELMO2Q96JJ3 720 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 MCCC1Q96RQ3 725 aaPredicted RBP11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 PITPNM3Q9BZ71 974 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 FAM107BQ9H098 131 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ZDHHC6Q9H6R6 413 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 MANSC1Q9H8J5 431 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 CAB39LQ9H9S4 337 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 ZFYVE1Q9HBF4 777 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 POPDC3Q9HBV1 291 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 FGFR1OP2Q9NVK5 253 aa11.07□□□□□ -0.64
CSNK1E-202ENST00000366216 GEMIN8Q9NWZ8 242 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms