RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ASTE1Q2TB18 679 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-202ENST00000361545 HPS6Q86YV9 775 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 SHISA4Q96DD7 197 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 PRICKLE1Q96MT3 831 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-202ENST00000361545 MRPS7Q9Y2R9 242 aaKnown RBP18.3■□□□□ 0.52
CLIP2-202ENST00000361545 TELO2Q9Y4R8 837 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 B3GALT2O43825 422 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 RGS20O76081 388 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 TIMM50Q3ZCQ8 353 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 GALNT18Q6P9A2 607 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 RTL4Q6ZR62 310 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 MCEMP1Q8IX19 187 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 PARP8Q8N3A8 854 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 INCA1Q0VD86 236 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 TOP3AQ13472 1001 aaPredicted RBP18.3■□□□□ 0.52
CLIP2-202ENST00000361545 EOGTQ5NDL2 527 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 ABRAXAS1Q6UWZ7 409 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 PTCHD4Q6ZW05 846 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 TAS1R3Q7RTX0 852 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 CDK15Q96Q40 435 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 PAIP1Q9H074 479 aaKnown RBP18.3■□□□□ 0.52
CLIP2-202ENST00000361545 GOLGA4Q13439 2230 aaKnown RBP18.3■□□□□ 0.52
CLIP2-202ENST00000361545 DYTNA2CJ06 578 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 NEMP2A6NFY4 417 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 G3V2T6 193 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 AVPR1BP47901 424 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 BNC1Q01954 994 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 CLNKQ7Z7G1 428 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 HEATR4Q86WZ0 1026 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 MYDGFQ969H8 173 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 ANKRD27Q96NW4 1050 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 ZSCAN5AQ9BUG6 496 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 MTRRQ9UBK8 725 aa18.3■□□□□ 0.52
CLIP2-202ENST00000361545 VIPR1P32241 457 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 DPYSL5Q9BPU6 564 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 KLF15Q9UIH9 416 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 LGALS3BPQ08380 585 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 NFATC2Q13469 925 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 OLIG2Q13516 323 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 C22orf39Q6P5X5 142 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 MAMDC4Q6UXC1 1216 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 MPP4Q96JB8 637 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 UPK3BL1B0FP48 263 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 UPK3BL2E5RIL1 263 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 ZNF865P0CJ78 1059 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-202ENST00000361545 CCNA2P20248 432 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 SOX4Q06945 474 aaPredicted RBP18.29■□□□□ 0.52
CLIP2-202ENST00000361545 GALNT5Q7Z7M9 940 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 ZNF598Q86UK7 904 aaKnown RBP18.29■□□□□ 0.52
CLIP2-202ENST00000361545 TMEM145Q8NBT3 493 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 CLPTM1LQ96KA5 538 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 RACGAP1Q9H0H5 632 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 ZNF358Q9NW07 568 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 SLC2A6Q9UGQ3 507 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 NRXN3Q9Y4C0 1643 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 ANKRD66B4E2M5 251 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 NELFEP18615 380 aaKnown RBP18.29■□□□□ 0.52
CLIP2-202ENST00000361545 PAX7P23759 505 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 OR52J3Q8NH60 311 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 C1orf109Q9NX04 203 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 COPS7AQ9UBW8 275 aa18.29■□□□□ 0.52
CLIP2-202ENST00000361545 ELOVL7A1L3X0 281 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 MT-ND1P03886 318 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 RHOP08100 348 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 GKP32189 559 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 MAGEA11P43364 429 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 C16orf72Q14CZ0 275 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 LRRC66Q68CR7 880 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 TMCO2Q7Z6W1 182 aaPredicted RBP18.28■□□□□ 0.52
CLIP2-202ENST00000361545 LRRTM4Q86VH4 590 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 SMG8Q8ND04 991 aaKnown RBP18.28■□□□□ 0.52
CLIP2-202ENST00000361545 AXIN1O15169 862 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 COCHO43405 550 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 GJB5O95377 273 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 OR10H5Q8NGA6 315 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 PRR5P85299 388 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 SLC25A11Q02978 314 aaKnown RBP18.28■□□□□ 0.52
CLIP2-202ENST00000361545 ERICH5Q6P6B1 374 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 CDADC1Q9BWV3 514 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 LRRC37A3O60309 1634 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 FAM208AQ9UK61 1670 aaKnown RBP18.28■□□□□ 0.52
CLIP2-202ENST00000361545 K7EPI3 171 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 RB1P06400 928 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 VARSP26640 1264 aaKnown RBP18.28■□□□□ 0.52
CLIP2-202ENST00000361545 YAP1P46937 504 aaKnown RBP18.28■□□□□ 0.52
CLIP2-202ENST00000361545 LIPEQ05469 1076 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 ATP1A4Q13733 1029 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 CYP1B1Q16678 543 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 UAP1L1Q3KQV9 507 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 DCAF12L1Q5VU92 463 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 BROXQ5VW32 411 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 NAT8LQ8N9F0 302 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 NPY6RQ99463 290 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 PAAF1Q9BRP4 392 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 RAB11FIP5Q9BXF6 653 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 EPB41L1Q9H4G0 881 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 STYXL1Q9Y6J8 313 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 A0A0D9SEW6 157 aa18.28■□□□□ 0.52
CLIP2-202ENST00000361545 WBP4O75554 376 aaKnown RBP18.28■□□□□ 0.52
CLIP2-202ENST00000361545 MFN2O95140 757 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms