RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 ZNF45Q02386 682 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 GRB7Q14451 532 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 OR2T5Q6IEZ7 315 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 SDE2Q6IQ49 451 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 CPNE9Q8IYJ1 553 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 OR2T29Q8NH02 315 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 CDK15Q96Q40 435 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 SLC39A8Q9C0K1 460 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 OR2B2Q9GZK3 357 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 OLAHQ9NV23 265 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 PTGFRNQ9P2B2 879 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 FAM172BPA6NC97 362 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 PTPN5P54829 565 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 GTF2H2Q13888 395 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 ARMC12Q5T9G4 340 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 GTF2H2CQ6P1K8 395 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 DOK6Q6PKX4 331 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 MFSD2AQ8NA29 543 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 SH3YL1Q96HL8 342 aaPredicted RBP15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 ERVK-18Q9QC07 812 aa15.75■□□□□ 0.11
CLSTN1-201ENST00000361311 A8MX80 341 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 GABRDO14764 452 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 FPGTO14772 594 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 ZNF26P17031 533 aaPredicted RBP15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 SDC2P34741 201 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 NUDT6P53370 316 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 RABGGTBP53611 331 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 UGT2B15P54855 530 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 CLDN10P78369 228 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 LAPTM4AQ15012 233 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 SLC39A12Q504Y0 691 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 TSPEARQ8WU66 669 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 CPNE5Q9HCH3 593 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 NUDT4Q9NZJ9 180 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 ADAMDEC1O15204 470 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 B4GAT1O43505 415 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 TSPAN1O60635 241 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 OR56A5P0C7T3 313 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 VARSP26640 1264 aaKnown RBP15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 GGT5P36269 586 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 TECRLQ5HYJ1 363 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 CEP97Q8IW35 865 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 TMEM102Q8N9M5 508 aaPredicted RBP15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 TBC1D15Q8TC07 691 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 ZNF778Q96MU6 729 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 MED28Q9H204 178 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 NECTIN3Q9NQS3 549 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 RNF11Q9Y3C5 154 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 ROBO1Q9Y6N7 1651 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 ORC5O43913 435 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 STX11O75558 287 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 NDST3O95803 873 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 CHRM5P08912 532 aaPredicted RBP15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 POU2F1P14859 743 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 DNAJA1P31689 397 aaKnown RBP15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 SCNN1GP51170 649 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 STARD3Q14849 445 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 KCNJ8Q15842 424 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 ZNF181Q2M3W8 571 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 TBRG1Q3YBR2 411 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 NOMO2Q5JPE7 1267 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 SHKBP1Q8TBC3 707 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 GRIN3AQ8TCU5 1115 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 RAB23Q9ULC3 237 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 ANGPT4Q9Y264 503 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 EFCAB14O75071 495 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 CDH12P55289 794 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 GNASQ5JWF2 1037 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 DDI2Q5TDH0 399 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 SLC30A2Q9BRI3 323 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 FAM118AQ9NWS6 357 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 VPS4AQ9UN37 437 aa15.74■□□□□ 0.11
CLSTN1-201ENST00000361311 TCRBV3S1A0A5B6 114 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 HLA-DQB2P05538 268 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 ALDH3B2P48448 385 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 CPT1AP50416 773 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 NCS1P62166 190 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 INCA1Q0VD86 236 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 TMEM199Q8N511 208 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 ZNF641Q96N77 438 aaPredicted RBP15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 B3GNT3Q9Y2A9 372 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 PCDHB5Q9Y5E4 795 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 E9PAM4 449 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 PGK1P00558 417 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 HTR1EP28566 365 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 NR4A2P43354 598 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 C1QTNF8P60827 252 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 PTSQ03393 145 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 IKBIPQ70UQ0 350 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 CCDC28AQ8IWP9 274 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 GPR156Q8NFN8 814 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 SLC1A7O00341 560 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 ECI2O75521 394 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 C1RP00736 705 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 MT-ND2P03891 347 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 PSKH1P11801 424 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 ZNF24P17028 368 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 RORCP51449 518 aa15.73■□□□□ 0.11
CLSTN1-201ENST00000361311 TRIM48Q8IWZ4 208 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms