RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 F8VP50 259 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 COL6A1P12109 1028 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 MC4RP32245 332 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF132P52740 706 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 PLEKHA6Q9Y2H5 1048 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 LOC100509620A0A075B734 347 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF705EA8MWA4 302 aaPredicted RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 HSBP1L1C9JCN9 74 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 GADD45GO95257 159 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SF1Q15637 639 aaKnown RBP9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SPIN3Q5JUX0 258 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 SLC30A10Q6XR72 485 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 BPIFA1Q9NP55 256 aa9.18□□□□□ -0.94
VPS13A-203ENST00000360280 PUM1Q14671 1186 aaKnown RBP eCLIP9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PGM5Q15124 567 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 FOXRED2Q8IWF2 684 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 OXR1Q8N573 874 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ATG10Q9H0Y0 220 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 CSN2P05814 226 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 HSD17B2P37059 387 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ASB15Q8WXK1 588 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PCBD2Q9H0N5 130 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ABCG8Q9H221 673 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 RIC1Q4ADV7 1423 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 A0A0G2JMP0 313 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PGLSO95336 258 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 VNN2O95498 520 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 SLC16A8O95907 504 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 DUSP4Q13115 394 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ARFRP1Q13795 201 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 COX18Q8N8Q8 333 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 OR4M2Q8NGB6 313 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 KLHL15Q96M94 604 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 OR2B2Q9GZK3 357 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 IFNA1P01562 189 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 XAGE5Q8WWM1 108 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 KCNN1Q92952 543 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PIWIL1Q96J94 861 aaKnown RBP9.17□□□□□ -0.94
VPS13A-203ENST00000360280 COPS8Q99627 209 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 IFT27Q9BW83 186 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 RGCCQ9H4X1 137 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ACKR2O00590 384 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ADH1CP00326 375 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 CPN2P22792 545 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PPATQ06203 517 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 CADM2Q8N3J6 435 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PCDH18Q9HCL0 1135 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ROBO2Q9HCK4 1378 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 UGT1A9O60656 530 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 AMHP03971 560 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ANXA4P09525 319 aaPredicted RBP9.17□□□□□ -0.94
VPS13A-203ENST00000360280 GNAZP19086 355 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 UGT1A6P19224 532 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 UGT1A1P22309 533 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 UGT1A4P22310 534 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 UGT1A3P35503 534 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PRKCIP41743 596 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ABL2P42684 1182 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ANKRD52Q8NB46 1076 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 OR10G6Q8NH81 332 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 TREX2Q9BQ50 279 aaPredicted RBP9.17□□□□□ -0.94
VPS13A-203ENST00000360280 SLC30A2Q9BRI3 323 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 UGT1A7Q9HAW7 530 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 UGT1A10Q9HAW8 530 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 UGT1A8Q9HAW9 530 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 DISP1Q96F81 1524 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 CTBP1Q13363 440 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 C7orf61Q8IZ16 206 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ITFG2Q969R8 447 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
VPS13A-203ENST00000360280 SMPD4Q9NXE4 827 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PLK2Q9NYY3 685 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 DNAJB4Q9UDY4 337 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PEX2P28328 305 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 TAS2R43P59537 309 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 LCP2Q13094 533 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 KLHDC10Q6PID8 442 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 HSDL2Q6YN16 418 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF649Q9BS31 505 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 MFSD1Q9H3U5 465 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 STK16O75716 305 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 CD36P16671 472 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ZYG11AQ6WRX3 759 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 TIMM8BQ9Y5J9 83 aaPredicted RBP9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF878C9JN71 531 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 BDNFP23560 247 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 XKP51811 444 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 SEMA5AQ13591 1074 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 BRMS1LQ5PSV4 323 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PSKH2Q96QS6 385 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PUS10Q3MIT2 529 aaKnown RBP9.17□□□□□ -0.94
VPS13A-203ENST00000360280 RALGPS2Q86X27 583 aaPredicted RBP9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ZDHHC21Q8IVQ6 265 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 ZNF101Q8IZC7 436 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 HDAC10Q969S8 669 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 SEMA3CQ99985 751 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 PCDH10Q9P2E7 1040 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 VWA7Q9Y334 891 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 DISP2A7MBM2 1401 aa9.17□□□□□ -0.94
VPS13A-203ENST00000360280 E2F3O00716 465 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms