RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 GPR33Q49SQ1 333 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 ARPINQ7Z6K5 226 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 PTGR2Q8N8N7 351 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 ICA1LQ8NDH6 482 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 CEP70Q8NHQ1 597 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 NAT14Q8WUY8 206 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 NECAB3Q96P71 396 aaPredicted RBP13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 RNF112Q9ULX5 631 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 DTNAQ9Y4J8 743 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 STON1Q9Y6Q2 735 aa13.64□□□□□ -0.23
CSNK1E-201ENST00000359867 A0A0U1RQS6 177 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 C19orf67A6NJJ6 358 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 E5RI56 91 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 GAPDHSO14556 408 aaPredicted RBP13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 CFLARO15519 480 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 LEFTY1O75610 366 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 PRAMEF1O95521 474 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 CHRM3P20309 590 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 METAP1P53582 386 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 PKNOX1P55347 436 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 MRPS22P82650 360 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 TLR1Q15399 786 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 USP45Q70EL2 814 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 ZSWIM9Q86XI8 627 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 CD200R1Q8TD46 325 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 PDLIM5Q96HC4 596 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 ZNF385DQ9H6B1 395 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 MEAF6Q9HAF1 191 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 FNDC3AQ9Y2H6 1198 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 DHRS7Q9Y394 339 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 UBXN8O00124 270 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 SDHDO14521 159 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 LSM1O15116 133 aaKnown RBP13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 NIPSNAP2O75323 286 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 SPAM1P38567 509 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 BTKQ06187 659 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 NFATC2Q13469 925 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 ARSIQ5FYB1 569 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 LRRC73Q5JTD7 316 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 C9orf64Q5T6V5 341 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 SERPINA9Q86WD7 417 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 SNX32Q86XE0 403 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 RBFAQ8N0V3 343 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 DCUN1D1Q96GG9 259 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 MCCC1Q96RQ3 725 aaPredicted RBP13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 ASB8Q9H765 288 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 IL26Q9NPH9 171 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 PFDN4Q9NQP4 134 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 TRAF6Q9Y4K3 522 aa13.63□□□□□ -0.23
CSNK1E-201ENST00000359867 GLYATL1P3A0A0U1RQE8 302 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 KRBA1A5PL33 1030 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 CCDC160A6NGH7 325 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 STX16-NPEPL1H3BU86 382 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 STX16O14662 325 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 KLK8O60259 260 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 TSPAN12O95859 305 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 FGF4P08620 206 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 THRAP10827 490 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 GFAPP14136 432 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 BPIP17213 487 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 TNFRSF4P43489 277 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 CHN2P52757 468 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 SEMG2Q02383 582 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 ZDHHC20Q5W0Z9 365 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 UGT2A3Q6UWM9 527 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 FAM151BQ6UXP7 276 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 FBXO39Q8N4B4 442 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 SIDT2Q8NBJ9 832 aaKnown RBP13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 JADE3Q92613 823 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 HEPHQ9BQS7 1158 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 CLPBQ9H078 707 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 GALPQ9UBC7 116 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 MUTYHQ9UIF7 546 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 GNPTGQ9UJJ9 305 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 FBXL21Q9UKT6 434 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 SARDHQ9UL12 918 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 EDDM13A0A1B0GTR0 161 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 ATP6V1B1P15313 513 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 DRD1P21728 446 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 CLCN7P51798 805 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 MTTPP55157 894 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 POLR2LP62875 67 aaKnown RBP13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 PFKFB4Q16877 469 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 PAOXQ6QHF9 649 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 CRTC1Q6UUV9 634 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 KBTBD6Q86V97 674 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 CLYBLQ8N0X4 340 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 IL17RCQ8NAC3 791 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 FUBP1Q96AE4 644 aaKnown RBP13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 CNBD2Q96M20 576 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 KLHL32Q96NJ5 620 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 SLC30A3Q99726 388 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 RTKNQ9BST9 563 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 C1QTNF3Q9BXJ4 246 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 UBAP1Q9NZ09 502 aa13.62□□□□□ -0.23
CSNK1E-201ENST00000359867 RGSL1A5PLK6 1076 aa13.61□□□□□ -0.23
CSNK1E-201ENST00000359867 AGAP14A8MT82 685 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms