RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 VAMP2P63027 116 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 WSCD2Q2TBF2 565 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CLEC12AQ5QGZ9 265 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 LRRC69Q6ZNQ3 347 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CEP76Q8TAP6 659 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 SGCDQ92629 289 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 RFT1Q96AA3 541 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CCDC177Q9NQR7 707 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 PARPBPQ9NWS1 579 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 STOX2Q9P2F5 926 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 ALG5Q9Y673 324 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CEP152O94986 1710 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CAMSAP1Q5T5Y3 1602 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 TRIM64A6NGJ6 449 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 BMP6P22004 513 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 OAZ1P54368 228 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 RANBP3LQ86VV4 465 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 SYNPOQ8N3V7 929 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 RASGEF1AQ8N9B8 481 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 TMEM203Q969S6 136 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 TAPBPLQ9BX59 468 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 KCND1Q9NSA2 647 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 MADDQ8WXG6 1647 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 DAPL1A0PJW8 107 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 GRM6O15303 877 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CD48P09326 243 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 PDX1P52945 283 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CACNG1Q06432 222 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 TIGD6Q17RP2 521 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 C9orf57Q5W0N0 161 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 PDE12Q6L8Q7 609 aaKnown RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 SYCE2Q6PIF2 218 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 SVOPLQ8N434 492 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 INO80EQ8NBZ0 244 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 GBA3Q9H227 469 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 MTRRQ9UBK8 725 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 PER2O15055 1255 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 GOT2P00505 430 aaKnown RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 RAB12Q6IQ22 244 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 KLHL35Q6PF15 583 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 GET4Q7L5D6 327 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 C11orf65Q8NCR3 313 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 DNAJC19Q96DA6 116 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 SLC39A3Q9BRY0 314 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 YIPF4Q9BSR8 244 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 BRD7Q9NPI1 651 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 TMEM5Q9Y2B1 443 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CLTCQ00610 1675 aaKnown RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 RIMS1Q86UR5 1692 aaKnown RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 VARSP26640 1264 aaKnown RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CORO1AP31146 461 aaKnown RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 SPAM1P38567 509 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 RFTN2Q52LD8 501 aaPredicted RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 NRSN1Q8IZ57 195 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 DENND6BQ8NEG7 585 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 SHC3Q92529 594 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 RIPOR3Q96MK2 946 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 ZSWIM3Q96MP5 696 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 TUBGCP5Q96RT8 1024 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 SPATA9Q9BWV2 254 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 KAT8Q9H7Z6 458 aaKnown RBP15.82■□□□□ 0.12
COL18A1-203ENST00000359759 RNF121Q9H920 327 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 TRPV4Q9HBA0 871 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 CDH7Q9ULB5 785 aa15.82■□□□□ 0.12
COL18A1-203ENST00000359759 TECPR2O15040 1411 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 FXYD6-FXYD2A0A087WZ82 144 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 AURKAO14965 403 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 UNC5BQ8IZJ1 945 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 TMED9Q9BVK6 235 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 FXYD6Q9H0Q3 95 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 MUC13Q9H3R2 512 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 NUDT4Q9NZJ9 180 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 PCDHB1Q9Y5F3 818 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 WNT10BO00744 389 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 STK16O75716 305 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 RLN2P04090 185 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 OR3A3P47888 321 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 OR3A2P47893 321 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 ADGRE1Q14246 886 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 ZBTB8BQ8NAP8 495 aaPredicted RBP15.81■□□□□ 0.12
COL18A1-203ENST00000359759 METTL21AQ8WXB1 218 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 MOV10Q9HCE1 1003 aaKnown RBP15.81■□□□□ 0.12
COL18A1-203ENST00000359759 MIOSQ9NXC5 875 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 TULP3O75386 442 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 BPNT1O95861 308 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 VIPP01282 170 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 SLC2A2P11168 524 aaPredicted RBP15.81■□□□□ 0.12
COL18A1-203ENST00000359759 HOXC12P31275 282 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 ARCN1P48444 511 aaKnown RBP15.81■□□□□ 0.12
COL18A1-203ENST00000359759 PCBP2Q15366 365 aaKnown RBP eCLIP15.81■□□□□ 0.124e-7■■■■■ 34
COL18A1-203ENST00000359759 TEX44Q53QW1 395 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 GRHL3Q8TE85 626 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 TRMOQ9BU70 441 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 UNC93B1Q9H1C4 597 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 MOCS1Q9NZB8 636 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 MEMO1Q9Y316 297 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 VEGFAP15692 232 aaPredicted RBP15.81■□□□□ 0.12
COL18A1-203ENST00000359759 PRKCHP24723 683 aa15.81■□□□□ 0.12
COL18A1-203ENST00000359759 POP5Q969H6 163 aaKnown RBP15.81■□□□□ 0.12
COL18A1-203ENST00000359759 CADM1Q9BY67 442 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms