RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 SLC6A2P23975 617 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 PPM1AP35813 382 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 MTHFRP42898 656 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 RANBP1P43487 201 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 APLP1P51693 650 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 LMAN2Q12907 356 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 SPIDRQ14159 915 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 SPANXN4Q5MJ08 99 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 SLC8B1Q6J4K2 584 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 RNF111Q6ZNA4 994 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 ATG16L2Q8NAA4 619 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 PLEKHG4BQ96PX9 1271 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 PANX1Q96RD7 426 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 SDR39U1Q9NRG7 319 aaPredicted RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 CMTM6Q9NX76 183 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 SMPD3Q9NY59 655 aaPredicted RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 A0A0G2JMZ2 1700 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 GLUD1P00367 558 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 CATP04040 527 aaKnown RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 CYP2A6P11509 494 aaPredicted RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 MTHFD2P13995 350 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 YAP1P46937 504 aaKnown RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 SETMARQ53H47 684 aaPredicted RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 GPR107Q5VW38 600 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 ZCCHC8Q6NZY4 707 aaKnown RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 FUNDC1Q8IVP5 155 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 FAM9CQ8IZT9 166 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 MARVELD2Q8N4S9 558 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 PHC3Q8NDX5 983 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 ING5Q8WYH8 240 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 ZNF382Q96SR6 550 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 SLCO3A1Q9UIG8 710 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 BACE2Q9Y5Z0 518 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 OAS3Q9Y6K5 1087 aaKnown RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 NUP214P35658 2090 aaPredicted RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 H3BSA7 217 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 GRM6O15303 877 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 TEX28O15482 410 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 RAD23AP54725 363 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 NFKB2Q00653 900 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 MERTKQ12866 999 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 ABRAXAS2Q15018 415 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 TYSND1Q2T9J0 566 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 ST13P5Q8NFI4 369 aaPredicted RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 PXYLP1Q8TE99 480 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 SLC22A17Q8WUG5 538 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 BCL7CQ8WUZ0 217 aaPredicted RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 OVCA2Q8WZ82 227 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 DGCR6LQ9BY27 220 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 FAM83DQ9H4H8 585 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 MAGEE1Q9HCI5 957 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 ZIM2Q9NZV7 527 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 RSL24D1Q9UHA3 163 aaKnown RBP10.99□□□□□ -0.65
SSU72-202ENST00000359060 DMTF1Q9Y222 760 aa10.99□□□□□ -0.65
SSU72-202ENST00000359060 ELOVL7A1L3X0 281 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 POP4O95707 220 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 TRBC1P01850 177 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 VARSP26640 1264 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 CHIT1Q13231 466 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 NAE1Q13564 534 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 METTL3Q86U44 580 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 PELI3Q8N2H9 469 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 TMEM199Q8N511 208 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 BIRC7Q96CA5 298 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 MTERF1Q99551 399 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 RIBC2Q9H4K1 309 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 C1orf109Q9NX04 203 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 ZDHHC7Q9NXF8 308 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 SLAMF8Q9P0V8 285 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 PRSS51A0A1B0GVH4 220 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 PITPNM1O00562 1244 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 ATXN8OSP0DMR3 200 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 PRIM2P49643 509 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 IHHQ14623 411 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 ARMC3Q5W041 872 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 ADGRG2Q8IZP9 1017 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 SCAMP4Q969E2 229 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 FBXL20Q96IG2 436 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 IL26Q9NPH9 171 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 TMEM181Q9P2C4 612 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 DYTNA2CJ06 578 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 SOCS2O14508 198 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 ACOT8O14734 319 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 RPS17P08708 135 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 AQP1P29972 269 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 CD70P32970 193 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 CTNNB1P35222 781 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 EEFSECP57772 596 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 OR4D2P58180 307 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 HTRA3P83110 453 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 MRPL58Q14197 206 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 PHKG1Q16816 387 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 GPR33Q49SQ1 333 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 NXPE1Q8N323 547 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 SPPL2AQ8TCT8 520 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 CYB5D2Q8WUJ1 264 aa10.98□□□□□ -0.65
SSU72-202ENST00000359060 AURKBQ96GD4 344 aaPredicted RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 LIN28AQ9H9Z2 209 aaKnown RBP10.98□□□□□ -0.65
SSU72-202ENST00000359060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms