RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 PDHA2P29803 388 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 RGS4P49798 205 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 RAB10P61026 200 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 CASP8Q14790 479 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 PAQR3Q6TCH7 311 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 XKR5Q6UX68 686 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 KANSL1Q7Z3B3 1105 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 CMC1Q7Z7K0 106 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 TDRPQ86YL5 185 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 CEP97Q8IW35 865 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 CPNE9Q8IYJ1 553 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 CNPY4Q8N129 248 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 RIBC1Q8N443 379 aaPredicted RBP14.92□□□□□ -0.02
TPM1-206ENST00000358278 MTBPQ96DY7 904 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 ZIM3Q96PE6 472 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 RUFY1Q96T51 708 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 ROPN1BQ9BZX4 212 aaPredicted RBP14.92□□□□□ -0.02
TPM1-206ENST00000358278 WWP1Q9H0M0 922 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 ROPN1Q9HAT0 212 aaPredicted RBP14.92□□□□□ -0.02
TPM1-206ENST00000358278 POPDC3Q9HBV1 291 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 GPAMQ9HCL2 828 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 CDYLQ9Y232 598 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 PCDHGB2Q9Y5G2 931 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 COL5A1P20908 1838 aaPredicted RBP14.92□□□□□ -0.02
TPM1-206ENST00000358278 HMX2A2RU54 273 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 C4orf47A7E2U8 309 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 SLCO2B1O94956 709 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 EML2O95834 649 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 ZNF37AP17032 561 aaPredicted RBP14.92□□□□□ -0.02
TPM1-206ENST00000358278 TYK2P29597 1187 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 SLC14A1Q13336 389 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 ACSBG2Q5FVE4 666 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 C6orf132Q5T0Z8 1188 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 AGAP9Q5VTM2 703 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 WASH2PQ6VEQ5 465 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 PDZD3Q86UT5 571 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 VRK3Q8IV63 474 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 SLC22A15Q8IZD6 547 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 OR4C6Q8NH72 309 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 OR52A5Q9H2C5 316 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 WASH6PQ9NQA3 447 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 SNX15Q9NRS6 342 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 PCOLCE2Q9UKZ9 415 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 WDR37Q9Y2I8 494 aa14.92□□□□□ -0.02
TPM1-206ENST00000358278 ASXL3Q9C0F0 2248 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 A6NCN8 305 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 FLRT2O43155 660 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 GDF9O60383 454 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 ALDOAP04075 364 aaKnown RBP14.91□□□□□ -0.02
TPM1-206ENST00000358278 CBSLP0DN79 551 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 ENO3P13929 434 aaPredicted RBP14.91□□□□□ -0.02
TPM1-206ENST00000358278 CRABP2P29373 138 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 ATP5DP30049 168 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 CBSP35520 551 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 IL2P60568 153 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 RASA2Q15283 850 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 ZKSCAN8Q15776 578 aaPredicted RBP14.91□□□□□ -0.02
TPM1-206ENST00000358278 KRT71Q3SY84 523 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 TAF1BQ53T94 588 aaPredicted RBP14.91□□□□□ -0.02
TPM1-206ENST00000358278 LRRC8EQ6NSJ5 796 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 ZCCHC8Q6NZY4 707 aaKnown RBP14.91□□□□□ -0.02
TPM1-206ENST00000358278 ABRAXAS1Q6UWZ7 409 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 IQCKQ8N0W5 287 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 NAGSQ8N159 534 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 EID2Q8N6I1 236 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 SPDYE1Q8NFV5 336 aaPredicted RBP14.91□□□□□ -0.02
TPM1-206ENST00000358278 PATE1Q8WXA2 126 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 LINGO1Q96FE5 620 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 RMDN2Q96LZ7 410 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 C12orf66Q96MD2 445 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 SYTL2Q9HCH5 934 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 IMP3Q9NV31 184 aaKnown RBP14.91□□□□□ -0.02
TPM1-206ENST00000358278 NFS1Q9Y697 457 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 CFAP20Q9Y6A4 193 aaKnown RBP14.91□□□□□ -0.02
TPM1-206ENST00000358278 CEP250Q9BV73 2442 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 PCM1Q15154 2024 aa14.91□□□□□ -0.02
TPM1-206ENST00000358278 SPEGQ15772 3267 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 PCNX2A6NKB5 2137 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 OR5K4A6NMS3 321 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 OR52A4PA6NMU1 304 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 EIF3FO00303 357 aaPredicted RBP14.9□□□□□ -0.02
TPM1-206ENST00000358278 BRAFP15056 766 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 KRT15P19012 456 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 GRK6P43250 576 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 ZNF844Q08AG5 666 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 BIRC2Q13490 618 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 GBX1Q14549 363 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 CLCA4Q14CN2 919 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 CEP85LQ5SZL2 805 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 LRIG3Q6UXM1 1119 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 HDXQ7Z353 690 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 SPNS2Q8IVW8 549 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 TRIM48Q8IWZ4 208 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 CFAP61Q8NHU2 1237 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 MAPK15Q8TD08 544 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 SETD7Q8WTS6 366 aaKnown RBP14.9□□□□□ -0.02
TPM1-206ENST00000358278 EEF1AKMT1Q8WVE0 214 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 CXorf40BQ96DE9 158 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 FOPNLQ96NB1 174 aa14.9□□□□□ -0.02
TPM1-206ENST00000358278 TMEM109Q9BVC6 243 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms