RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 RPL14P50914 215 aaKnown RBP16.71■□□□□ 0.27
TPM1-205ENST00000357980 ARFIP2P53365 341 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 AQP5P55064 265 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 FBXO48Q5FWF7 155 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 PGBD3Q8N328 593 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 TSTD1Q8NFU3 115 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 OR2L2Q8NH16 312 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 NSUN5Q96P11 429 aaKnown RBP16.71■□□□□ 0.27
TPM1-205ENST00000357980 HHIPQ96QV1 700 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 SHCBP1LQ9BZQ2 653 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 COG4Q9H9E3 785 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 PTBP2Q9UKA9 531 aaKnown RBP16.71■□□□□ 0.27
TPM1-205ENST00000357980 PCTPQ9UKL6 214 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 PDE10AQ9Y233 779 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 ASB1Q9Y576 335 aa16.71■□□□□ 0.27
TPM1-205ENST00000357980 MATN2O00339 956 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 SLC16A5O15375 505 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 POP7O75817 140 aaKnown RBP16.7■□□□□ 0.26
TPM1-205ENST00000357980 HK2P52789 917 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 IFT88Q13099 833 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 UBE2R2Q712K3 238 aaPredicted RBP16.7■□□□□ 0.26
TPM1-205ENST00000357980 AGR3Q8TD06 166 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 ZNF483Q8TF39 744 aaPredicted RBP16.7■□□□□ 0.26
TPM1-205ENST00000357980 SKA2Q8WVK7 121 aaPredicted RBP16.7■□□□□ 0.26
TPM1-205ENST00000357980 CLDN23Q96B33 292 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 PARVBQ9HBI1 364 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 EML4Q9HC35 981 aaKnown RBP16.7■□□□□ 0.26
TPM1-205ENST00000357980 TNFRSF12AQ9NP84 129 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 VCANP13611 3396 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 MGAT4DA6NG13 374 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 E2F3O00716 465 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 PSIP1O75475 530 aaKnown RBP16.7■□□□□ 0.26
TPM1-205ENST00000357980 PDHA2P29803 388 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 CDH13P55290 713 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 NAA20P61599 178 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 ARHGAP8P85298 464 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 CDKL1Q00532 357 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 PCBP2Q15366 365 aaKnown RBP eCLIP16.7■□□□□ 0.262e-12■■■■□ 19.4
TPM1-205ENST00000357980 CDKL4Q5MAI5 379 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 ANKS6Q68DC2 871 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 CUZD1Q86UP6 607 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 LRRTM4Q86VH4 590 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 OXR1Q8N573 874 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 PJA1Q8NG27 643 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 HM13Q8TCT9 377 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 UBTD2Q8WUN7 234 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 RHBDF1Q96CC6 855 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 MYOCQ99972 504 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 APOOQ9BUR5 198 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 CHRDQ9H2X0 955 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 ABCF3Q9NUQ8 709 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 EIF2B4Q9UI10 523 aaKnown RBP16.7■□□□□ 0.26
TPM1-205ENST00000357980 PRKAB1Q9Y478 270 aa16.7■□□□□ 0.26
TPM1-205ENST00000357980 POM121BA6NF01 834 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 TAPBPO15533 448 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 GUCA1CO95843 209 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 FUCA1P04066 466 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 S100BP04271 92 aaPredicted RBP16.69■□□□□ 0.26
TPM1-205ENST00000357980 TSPAN8P19075 237 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 RPIAP49247 311 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 CLCQ05315 142 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 C18orf21Q32NC0 220 aaPredicted RBP16.69■□□□□ 0.26
TPM1-205ENST00000357980 SH2D4BQ5SQS7 431 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 SULT1C3Q6IMI6 304 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 MBOAT1Q6ZNC8 495 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 TRPM8Q7Z2W7 1104 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 CFAP206Q8IYR0 622 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 ESAMQ96AP7 390 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 ASB2Q96Q27 587 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 EBF4Q9BQW3 602 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 STN1Q9H668 368 aaKnown RBP16.69■□□□□ 0.26
TPM1-205ENST00000357980 ZBTB26Q9HCK0 441 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 CYP8B1Q9UNU6 501 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 SLC17A4Q9Y2C5 497 aa16.69■□□□□ 0.26
TPM1-205ENST00000357980 TNPO3Q9Y5L0 923 aaKnown RBP16.69■□□□□ 0.26
TPM1-205ENST00000357980 CCT8L1PA6NM43 557 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 TMEM233B4DJY2 109 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 PPP6CO00743 305 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 HDAC3O15379 428 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 GRID2O43424 1007 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 CEACAM5P06731 702 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 HOXC4P09017 264 aaPredicted RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 HNRNPA2B1P22626 353 aaKnown RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 SH3BP2P78314 561 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 PLOD1Q02809 727 aaPredicted RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 LCP2Q13094 533 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 NFE2L1Q14494 772 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 PLA2G4EQ3MJ16 856 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 FAM83HQ6ZRV2 1179 aaPredicted RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 MAPK15Q8TD08 544 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 CCT6BQ92526 530 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 TOE1Q96GM8 510 aaKnown RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 TMEM79Q9BSE2 394 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 WWP1Q9H0M0 922 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 DPEP2Q9H4A9 486 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 C6orf106Q9H6K1 298 aaPredicted RBP16.68■□□□□ 0.26
TPM1-205ENST00000357980 EBF2Q9HAK2 575 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 DNAJC28Q9NX36 388 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 SLC23A2Q9UGH3 650 aa16.68■□□□□ 0.26
TPM1-205ENST00000357980 MUTYHQ9UIF7 546 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms