RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 F8VP50 259 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 EIF3FO00303 357 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CLDN11O75508 207 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RSL1D1O76021 490 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 MZF1P28698 734 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 UGT2B10P36537 528 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 NFE2L1Q14494 772 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 DCST1Q5T197 706 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 COPS8Q99627 209 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 TET1Q8NFU7 2136 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 XKRYO14609 159 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RPP40O75818 363 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF37AP17032 561 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 TCF7P36402 384 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 GTF2A2P52657 109 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 FUT2Q10981 343 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 HEPACAMQ14CZ8 416 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PAOXQ6QHF9 649 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 TRIB3Q96RU7 358 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 DPAGT1Q9H3H5 408 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 EVA1AQ9H8M9 152 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ZDHHC18Q9NUE0 388 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 C1orf109Q9NX04 203 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PARP4Q9UKK3 1724 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 SETD2Q9BYW2 2564 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 MALRD1Q5VYJ5 2156 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RCBTB2O95199 551 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CLDN9O95484 217 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 KHKP50053 298 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 IDH3AP50213 366 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 HLCSP50747 726 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 MRPS10P82664 201 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 GSTM4Q03013 218 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 MOGSQ13724 837 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 FAM98CQ17RN3 349 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 FAAH2Q6GMR7 532 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 GLYATQ6IB77 296 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ALYREFQ86V81 257 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 GID4Q8IVV7 300 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 FSTL5Q8N475 847 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 NTPCRQ9BSD7 190 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ANKRD60Q9BZ19 345 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 NOCTQ9UK39 431 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 TNFRSF11BO00300 401 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 MYF6P23409 242 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ACTBP60709 375 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ACTG1P63261 375 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ARL13AQ5H913 290 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 OLFML2AQ68BL7 652 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 METAP1DQ6UB28 335 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 LRRC69Q6ZNQ3 347 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 OR6J1Q8NGC5 347 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 OR52K1Q8NGK4 314 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 GLOD4Q9HC38 313 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RNF6Q9Y252 685 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PRODHO43272 600 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 XYLBO75191 536 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PSMD10O75832 226 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ERCC1P07992 297 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 HSD17B1P14061 328 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 MATN1P21941 496 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 SMSP52788 366 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RPP38P78345 283 aaKnown RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ANKRD13BQ86YJ7 626 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ZSWIM3Q96MP5 696 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 SNX10Q9Y5X0 201 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 YBX3P16989 372 aaKnown RBP eCLIP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 AVPR1AP37288 418 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PGDP52209 483 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 NKAPLQ5M9Q1 402 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 OR8H3Q8N146 312 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CENPSQ8N2Z9 138 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CPB2Q96IY4 423 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 EXO5Q9H790 373 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 WDR70Q9NW82 654 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 A0A087X0B3 334 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 NFICP08651 508 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 ADRA1BP35368 520 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PIK3R6Q5UE93 754 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 VSIG10LQ86VR7 867 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 KDM1BQ8NB78 822 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 SLC16A10Q8TF71 515 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 GPN2Q9H9Y4 310 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PDP1Q9P0J1 537 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 UBQLN2Q9UHD9 624 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 HEBP2Q9Y5Z4 205 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 OR2AG2A6NM03 316 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 HMGCS2P54868 508 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 TOMM5Q8N4H5 51 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 SGCDQ92629 289 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 LENG8Q96PV6 779 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-202ENST00000357162 RDH8Q9NYR8 311 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 MOCS1Q9NZB8 636 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 FER1L6Q2WGJ9 1857 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CCRL2O00421 344 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 CXCL11O14625 94 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PRAMEF12O95522 483 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PTGIRP43119 386 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 PTPN5P54829 565 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 WSCD2Q2TBF2 565 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms