RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 TULP3O75386 442 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 CABYRO75952 493 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 RECQL4O94761 1208 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 TNFSF9P41273 254 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC18A2Q05940 514 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 TARDBPQ13148 414 aaKnown RBP eCLIP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 ADAM15Q13444 863 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 TMC8Q8IU68 726 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 C12orf29Q8N999 325 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 NKX1-2Q9UD57 310 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC27A5Q9Y2P5 690 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SPIN1Q9Y657 262 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 C1orf167Q5SNV9 1468 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SMIM30A4D0T7 59 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC35F4A4IF30 521 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 TRAFD1O14545 582 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 RPS2P15880 293 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 EDNRAP25101 427 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 MAGEA11P43364 429 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 ASMTP46597 345 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 MTPNP58546 118 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 IL17AQ16552 155 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 ZBTB2Q8N680 514 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 ANKRD52Q8NB46 1076 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 IFT27Q9BW83 186 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SAV1Q9H4B6 383 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 CD84Q9UIB8 345 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 KCNE2Q9Y6J6 123 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 J3QRK9 145 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 PQBP1O60828 265 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 PCCBP05166 539 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 PSMA6P60900 246 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SEMA3AQ14563 771 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 BRMS1LQ5PSV4 323 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC44A1Q8WWI5 657 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 FBXL8Q96CD0 374 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 LENG8Q96PV6 779 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 GAD1Q99259 594 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 COPS8Q99627 209 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 ZNF670Q9BS34 389 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SSU72Q9NP77 194 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 SALL4Q9UJQ4 1053 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 FBXO5Q9UKT4 447 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 AGO1Q9UL18 857 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 TECPR2O15040 1411 aa10.89□□□□□ -0.67
GTF3C1-201ENST00000356183 ZNF878C9JN71 531 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 GPIP06744 558 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 MTHFD1P11586 935 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 CYP2C18P33260 490 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 KIR3DL1P43629 444 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 ACADVLP49748 655 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 PPP4CP60510 307 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 CBLBQ13191 982 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 ZNF598Q86UK7 904 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 RBM12BQ8IXT5 1001 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 REPS2Q8NFH8 660 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 MTMR9Q96QG7 549 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 TTYH2Q9BSA4 534 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 ZNF717Q9BY31 904 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 POLR2J2Q9GZM3 115 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 NFASCO94856 1347 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 TRAV6A0A075B6T7 132 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 C12orf71A8MTZ7 269 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 LAMP2P13473 410 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 CDH15P55291 814 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 HUNKP57058 714 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 MAB21L1Q13394 359 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 RBM48Q5RL73 367 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 GALNT7Q86SF2 657 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 PAQR7Q86WK9 346 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 RIOX2Q8IUF8 465 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 ZMIZ2Q8NF64 920 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 OR2AJ1Q8NGZ0 328 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 PFDN5Q99471 154 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 PTPN18Q99952 460 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 C2orf49Q9BVC5 232 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 H7C2Y5 167 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 E2F3O00716 465 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 HK1P19367 917 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 AHCYP23526 432 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 PRDX6P30041 224 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC26A2P50443 739 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 BACE1P56817 501 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 XKRXQ6PP77 449 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 TMED4Q7Z7H5 227 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 SNX29P2Q8IUI4 249 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 BEX2Q9BXY8 128 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 BEX1Q9HBH7 125 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 FBXW2Q9UKT8 454 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 E9PAM4 449 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 TBX10O75333 385 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 CLDN9O95484 217 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 MAP3K8P41279 467 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 EIF5AP63241 154 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 NPTX1Q15818 432 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 TSTQ16762 297 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 SLC25A25Q6KCM7 469 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 KLHL36Q8N4N3 616 aa10.88□□□□□ -0.67
GTF3C1-201ENST00000356183 TRPM4Q8TD43 1214 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms