RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 MROQ9BYG7 248 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 NFKBIZQ9BYH8 718 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 DCSTAMPQ9H295 470 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 TPK1Q9H3S4 243 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 ELOVL7A1L3X0 281 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 SOBPA7XYQ1 873 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 IRAK2O43187 625 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 CPSF4O95639 269 aaKnown RBP13.4□□□□□ -0.26
TRIM4-203ENST00000355947 CHRNA1P02708 482 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 COL6A1P12109 1028 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 ARHGDIAP52565 204 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 ERVK-8P63133 956 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 IHHQ14623 411 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRIM4-203ENST00000355947 ARMC8Q8IUR7 673 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 PROX1Q92786 737 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 IL37Q9NZH6 218 aa13.4□□□□□ -0.26
TRIM4-203ENST00000355947 PDP1Q9P0J1 537 aaPredicted RBP13.4□□□□□ -0.26
TRIM4-203ENST00000355947 IDH3BO43837 385 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 DDNO94850 711 aaPredicted RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 UMPSP11172 480 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 PCSK1P29120 753 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 GRK4P32298 578 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 C10orf120Q5SQS8 335 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 CES5AQ6NT32 575 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 PIK3C3Q8NEB9 887 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 OR6K2Q8NGY2 324 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 HDAC2Q92769 488 aaKnown RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 LGALS12Q96DT0 336 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 CDCA5Q96FF9 252 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 SYTL2Q9HCH5 934 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 TLR9Q9NR96 1032 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 NOX1Q9Y5S8 564 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 LAMA3Q16787 3333 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 BRCA2P51587 3418 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 ANK1P16157 1881 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 SLC7A4O43246 635 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 RAMP2O60895 175 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 VPS26AO75436 327 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 CPNE6O95741 557 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 VIPP01282 170 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 POU2F1P14859 743 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 SPNP16150 400 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 ADRA1AP35348 466 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 ERVPABLB-1P60509 514 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 ILF2Q12905 390 aaKnown RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 ABRAXAS2Q15018 415 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 INTS6LQ5JSJ4 861 aaKnown RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 RBM48Q5RL73 367 aaKnown RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 ADHFE1Q8IWW8 467 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 PDPRQ8NCN5 879 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 L3HYPDHQ96EM0 354 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 DOK1Q99704 481 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 RBM4BQ9BQ04 359 aaKnown RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 RBM4Q9BWF3 364 aaKnown RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 DNAJB9Q9UBS3 223 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 FKBPLQ9UIM3 349 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 PCDHB14Q9Y5E9 798 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 DNMT3AQ9Y6K1 912 aaPredicted RBP13.39□□□□□ -0.27
TRIM4-203ENST00000355947 MYO10Q9HD67 2058 aa13.39□□□□□ -0.27
TRIM4-203ENST00000355947 PNMA8CA0A1B0GUJ8 204 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 FAM234BA2RU67 622 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 IQCA1LA6NCM1 817 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 PDZK1P1A8MUH7 402 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 H0YAE9 185 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ENO2P09104 434 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 DNAJB2P25686 324 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 POU1F1P28069 291 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CYP27C1Q4G0S4 372 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 SLC39A12Q504Y0 691 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ZNF648Q5T619 568 aaPredicted RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 DESI1Q6ICB0 168 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 VTCN1Q7Z7D3 282 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 LRRTM3Q86VH5 581 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 LIX1Q8N485 282 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CELF2-AS1Q8N7Q2 184 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 RTL3Q8N8U3 475 aaKnown RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 OR7D4Q8NG98 312 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 PPTC7Q8NI37 304 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 KCTD13Q8WZ19 329 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 REXO5Q96IC2 774 aaKnown RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ATOH8Q96SQ7 321 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 MBOAT4Q96T53 435 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 TUBA1CQ9BQE3 449 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 GTF2IRD1Q9UHL9 959 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 SAMHD1Q9Y3Z3 626 aaKnown RBP13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CNMDO75829 334 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 MMP3P08254 477 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 UROSP10746 265 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CD40LGP29965 261 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 DCTP40126 519 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 LHX1P48742 406 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 SCAPQ12770 1279 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CBLBQ13191 982 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CDK5R2Q13319 367 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 ARHGEF7Q14155 803 aa13.38□□□□□ -0.27
TRIM4-203ENST00000355947 CTF1Q16619 201 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms