RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 LCA5Q86VQ0 697 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 SLC26A11Q86WA9 606 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 DENND1CQ8IV53 801 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 LGI2Q8N0V4 545 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 CNTD1Q8N815 330 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 SLC44A1Q8WWI5 657 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 SORCS1Q8WY21 1168 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 ARHGEF2Q92974 986 aaKnown RBP6.92□□□□□ -1.3
VPS13A-201ENST00000355766 ARL8AQ96BM9 186 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 HMCESQ96FZ2 354 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 SGSM3Q96HU1 749 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 FEM1CQ96JP0 617 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 PRICKLE1Q96MT3 831 aaPredicted RBP6.92□□□□□ -1.3
VPS13A-201ENST00000355766 FERD3LQ96RJ6 166 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 RANBP9Q96S59 729 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 SRPK1Q96SB4 655 aaKnown RBP6.92□□□□□ -1.3
VPS13A-201ENST00000355766 MGME1Q9BQP7 344 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 GORASP1Q9BQQ3 440 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 KIFC1Q9BW19 673 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 FSD1LQ9BXM9 530 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 MAGEB5Q9BZ81 275 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 CIPCQ9C0C6 399 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 CCDC134Q9H6E4 229 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 C10orf88Q9H8K7 445 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 VPS37BQ9H9H4 285 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 SGK2Q9HBY8 427 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 ASCL3Q9NQ33 180 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 THSD1Q9NS62 852 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 ELOVL2Q9NXB9 296 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 MOCS1Q9NZB8 636 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 MPP6Q9NZW5 540 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 SEPT10Q9P0V9 454 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 NUDT5Q9UKK9 219 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 ZNF451Q9Y4E5 1061 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 IKBKGQ9Y6K9 419 aa6.92□□□□□ -1.3
VPS13A-201ENST00000355766 A0A1W2PR77 199 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 GOLGA8MH3BSY2 632 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 PRPF4O43172 522 aaKnown RBP eCLIP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 KDELR3O43731 214 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 KRT38O76015 456 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 C1QAP02745 245 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 KLKB1P03952 638 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 DNTTP04053 509 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 CYBBP04839 570 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 FGF1P05230 155 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 HLA-DQB2P05538 268 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 RHOCP08134 193 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 INHBAP08476 426 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 DBHP09172 617 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 ZNF16P17020 682 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 PAMP19021 973 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 SLC6A4P31645 630 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 MSH2P43246 934 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 LIMS1P48059 325 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 LSSP48449 732 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 PLK1P53350 603 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 NXPH1P58417 271 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 RPL26P61254 145 aaKnown RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 MAGOHP61326 146 aaKnown RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 RPS14P62263 151 aaKnown RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 E2F1Q01094 437 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 CDH18Q13634 790 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 ZNF235Q14590 738 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 CRYMQ14894 314 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 UGP2Q16851 508 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 TMEM215Q68D42 235 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 CXorf57Q6NSI4 855 aaKnown RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 RETSATQ6NUM9 610 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 RANBP10Q6VN20 620 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 CCDC91Q7Z6B0 441 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 TFAP2DQ7Z6R9 452 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 TRABD2AQ86V40 505 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 EXD3Q8N9H8 876 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 OR2W6PQ8NHA6 318 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 ACMSDQ8TDX5 336 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 OXNAD1Q96HP4 312 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 CELF6Q96J87 481 aaKnown RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 AGAP3Q96P47 875 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 DEPDC7Q96QD5 511 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 PAFAH2Q99487 392 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 TBL1YQ9BQ87 522 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 MLPHQ9BV36 600 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 SLC2A11Q9BYW1 496 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 TMEM245Q9H330 911 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 POLR1BQ9H9Y6 1135 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 AASDHPPTQ9NRN7 309 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 STARD5Q9NSY2 213 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 RBM22Q9NW64 420 aaKnown RBP eCLIP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 UBA2Q9UBT2 640 aaPredicted RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 PPT2Q9UMR5 302 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 RPL26L1Q9UNX3 145 aaKnown RBP6.91□□□□□ -1.3
VPS13A-201ENST00000355766 CHMP2BQ9UQN3 213 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 TTLL3Q9Y4R7 772 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 SNX10Q9Y5X0 201 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 BSNQ9UPA5 3926 aa6.91□□□□□ -1.3
VPS13A-201ENST00000355766 ANKRD17O75179 2603 aaKnown RBP6.9□□□□□ -1.3
VPS13A-201ENST00000355766 NYNRINQ9P2P1 1898 aaKnown RBP6.9□□□□□ -1.3
VPS13A-201ENST00000355766 CKAP5Q14008 2032 aa6.9□□□□□ -1.3
VPS13A-201ENST00000355766 MYOFQ9NZM1 2061 aa6.9□□□□□ -1.3
VPS13A-201ENST00000355766 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms