RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 DDX39BQ13838 428 aaKnown RBP13.57□□□□□ -0.24
EBF3-201ENST00000355311 IMPG1Q17R60 797 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 KANK2Q63ZY3 851 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 BLOC1S3Q6QNY0 202 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 ANKS3Q6ZW76 656 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 STK32CQ86UX6 486 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 FAM126BQ8IXS8 530 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 CLEC4FQ8N1N0 589 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 PCSK9Q8NBP7 692 aaKnown RBP13.57□□□□□ -0.24
EBF3-201ENST00000355311 PNPT1Q8TCS8 783 aaKnown RBP13.57□□□□□ -0.24
EBF3-201ENST00000355311 ZNF597Q96LX8 424 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 PSKH2Q96QS6 385 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 EFHD1Q9BUP0 239 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 PRDM8Q9NQV8 689 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 SLC6A13Q9NSD5 602 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 PNPLA3Q9NST1 481 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 PKP3Q9Y446 797 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 WASH4PA8MWX3 477 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 FAM155AB1AL88 458 aaPredicted RBP13.57□□□□□ -0.24
EBF3-201ENST00000355311 CLOCKO15516 846 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 FASP25445 335 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 TXNL4AP83876 142 aaKnown RBP13.57□□□□□ -0.24
EBF3-201ENST00000355311 TNK2Q07912 1038 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 DNASE1L3Q13609 305 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 CDH18Q13634 790 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 ATP6AP1LQ52LC2 224 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 GLYATQ6IB77 296 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 DHRS4L2Q6PKH6 230 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 ENPP6Q6UWR7 440 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 PIWIL3Q7Z3Z3 882 aaKnown RBP13.57□□□□□ -0.24
EBF3-201ENST00000355311 SERPINA9Q86WD7 417 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 C10orf111Q8N326 155 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 CATSPER1Q8NEC5 780 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 BPIFB6Q8NFQ5 453 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 BORCS5Q969J3 196 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 TAMM41Q96BW9 452 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 BIRC7Q96CA5 298 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 FUBP3Q96I24 572 aaKnown RBP eCLIP13.57□□□□□ -0.24
EBF3-201ENST00000355311 CHID1Q9BWS9 393 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 SYTL2Q9HCH5 934 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 POLE4Q9NR33 117 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 NLE1Q9NVX2 485 aaPredicted RBP13.57□□□□□ -0.24
EBF3-201ENST00000355311 TMEM98Q9Y2Y6 226 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 NLRC5Q86WI3 1866 aa13.57□□□□□ -0.24
EBF3-201ENST00000355311 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 H3BNC9 293 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 PAPSS2O95340 614 aaPredicted RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 TCEA1P23193 301 aaKnown RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 PGS1Q32NB8 556 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 ANKRD26P1Q6NSI1 321 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 GCNT7Q6ZNI0 430 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 KLHDC8BQ8IXV7 354 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 BEND7Q8N7W2 519 aaPredicted RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 TMEM125Q96AQ2 219 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 ADI1Q9BV57 179 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 INVSQ9Y283 1065 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 GPC6Q9Y625 555 aaPredicted RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 PTGES3LE9PB15 166 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 E2F3O00716 465 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 WISP3O95389 354 aaPredicted RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 C8BP07358 591 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 SP3Q02447 781 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 RFTN1Q14699 578 aaPredicted RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 SF3B4Q15427 424 aaKnown RBP eCLIP13.56□□□□□ -0.24
EBF3-201ENST00000355311 FAM174BQ3ZCQ3 159 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 NHSL2Q5HYW2 709 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 ADGRG5Q8IZF4 528 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 NCLNQ969V3 563 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 EGLN2Q96KS0 407 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 TSSK3Q96PN8 268 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 TCF12Q99081 682 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 ATG10Q9H0Y0 220 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 HIPK3Q9H422 1215 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 CARS2Q9HA77 564 aaKnown RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 SDR39U1Q9NRG7 319 aaPredicted RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 ELOVL2Q9NXB9 296 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 VAPAQ9P0L0 249 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 PTPRDP23468 1912 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 EOMESO95936 686 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 CHEK2O96017 543 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 SLC10A3P09131 477 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 MATN1P21941 496 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 CCDC80Q76M96 950 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 GOLGA7Q7Z5G4 137 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 ITIH5Q86UX2 942 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 BBS2Q9BXC9 721 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 NPLQ9BXD5 320 aaPredicted RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 VN1R3Q9BXE9 311 aa13.56□□□□□ -0.24
EBF3-201ENST00000355311 TFB2MQ9H5Q4 396 aaKnown RBP13.56□□□□□ -0.24
EBF3-201ENST00000355311 ATG2BQ96BY7 2078 aa13.55□□□□□ -0.24
EBF3-201ENST00000355311 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.55□□□□□ -0.24
EBF3-201ENST00000355311 LCHNA4D1U4 455 aa13.55□□□□□ -0.24
EBF3-201ENST00000355311 AGRPO00253 132 aa13.55□□□□□ -0.24
EBF3-201ENST00000355311 SEC22BO75396 215 aa13.55□□□□□ -0.24
EBF3-201ENST00000355311 MYCLP1P12525 358 aaPredicted RBP13.55□□□□□ -0.24
EBF3-201ENST00000355311 CYP4B1P13584 511 aa13.55□□□□□ -0.24
EBF3-201ENST00000355311 IL7RP16871 459 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms