RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 LIMD1Q9UGP4 676 aa4.79□□□□□ -1.64
HMBOX1-202ENST00000355231 RIMS3Q9UJD0 308 aa4.79□□□□□ -1.64
HMBOX1-202ENST00000355231 KLHL21Q9UJP4 597 aa4.79□□□□□ -1.64
HMBOX1-202ENST00000355231 LIPT1Q9Y234 373 aa4.79□□□□□ -1.64
HMBOX1-202ENST00000355231 SAMHD1Q9Y3Z3 626 aaKnown RBP4.79□□□□□ -1.64
HMBOX1-202ENST00000355231 HSPE1-MOB4S4R3N1 261 aa4.79□□□□□ -1.64
HMBOX1-202ENST00000355231 MROH6A6NGR9 719 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 ZNF729A6NN14 1252 aaPredicted RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 M0R3G1 203 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 KCNK1O00180 336 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CDC7O00311 574 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 TERTO14746 1132 aaKnown RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 INPPL1O15357 1258 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SGCEO43556 437 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 UGT2B11O75310 529 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 PTBP3O95758 552 aaKnown RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 IFNA7P01567 189 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 OPN1LWP04000 364 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 LCKP06239 509 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 DLDP09622 509 aaKnown RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 ZDHHC11BP0C7U3 371 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 RALBP11234 206 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 PRF1P14222 555 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 ZNF30P17039 623 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 TNNI3P19429 210 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 MX2P20592 715 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 C4BPBP20851 252 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 MATN1P21941 496 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 UBA1P22314 1058 aaKnown RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 FGFR4P22455 802 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 IL1R2P27930 398 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 NOS2P35228 1153 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 ARL2P36404 184 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SOX9P48436 509 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 GCLMP48507 274 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 LIG4P49917 911 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 HLCSP50747 726 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 RNF144AP50876 292 aaPredicted RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 RIDAP52758 137 aaKnown RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CAPZA1P52907 286 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CDH4P55283 916 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CCL23P55773 120 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 TAS2R60P59551 318 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 EIF3EP60228 445 aaKnown RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CLDN10P78369 228 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SMAD3P84022 425 aaKnown RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SP2Q02086 613 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 GCNT1Q02742 428 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CYP24A1Q07973 514 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CUL2Q13617 745 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 MPP2Q14168 576 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 STARD3Q14849 445 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 GPNMBQ14956 572 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 HIST2H2ACQ16777 129 aaPredicted RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 DUSP6Q16828 381 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 MINDY4Q4G0A6 757 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 DUSP28Q4G0W2 176 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 MDH1BQ5I0G3 518 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 NOMO2Q5JPE7 1267 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 PDSS1Q5T2R2 415 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 BROXQ5VW32 411 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 KRT39Q6A163 491 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 TFAP2EQ6VUC0 442 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 C15orf39Q6ZRI6 1047 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SLC16A12Q6ZSM3 486 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 TMEM26Q6ZUK4 368 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 RFX8Q6ZV50 586 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 BBS12Q6ZW61 710 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 PRSS48Q7RTY5 328 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 PRPF39Q86UA1 669 aaKnown RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 NT5DC3Q86UY8 548 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 RAB43Q86YS6 212 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 HIPK1Q86Z02 1210 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 LYSMD2Q8IV50 215 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 FAM217AQ8IXS0 508 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 PDIK1LQ8N165 341 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SCML4Q8N228 414 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 GPD1LQ8N335 351 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SFRP1Q8N474 314 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 MFSD2AQ8NA29 543 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 ATG16L2Q8NAA4 619 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 AVL9Q8NBF6 648 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 IL17RDQ8NFM7 739 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CLHC1Q8NHS4 586 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 MAGEE2Q8TD90 523 aaPredicted RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 ATOH1Q92858 354 aaPredicted RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 FEM1CQ96JP0 617 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 GLT1D1Q96MS3 346 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 KREMEN1Q96MU8 473 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 CSPG4P5Q96PW8 444 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 PCYT2Q99447 389 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 AGPAT1Q99943 283 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 DPYSL5Q9BPU6 564 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 FAM118BQ9BPY3 351 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 GSDMCQ9BYG8 508 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 POLR3FQ9H1D9 316 aaPredicted RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 OSGEPL1Q9H4B0 414 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 RANBP3Q9H6Z4 567 aaPredicted RBP4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SYNDIG1Q9H7V2 258 aa4.78□□□□□ -1.64
HMBOX1-202ENST00000355231 SLCO1B3Q9NPD5 702 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms