RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MAP2K5Q13163 448 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 PITRM1Q5JRX3 1037 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 TOR1AIP1Q5JTV8 583 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 SNIP1Q8TAD8 396 aaKnown RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CEP76Q8TAP6 659 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CCDC120Q96HB5 630 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CENPMQ9NSP4 180 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CD84Q9UIB8 345 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 SCDO00767 359 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 MAT2AP31153 395 aaKnown RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CXCL9Q07325 125 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 LDLRAP1Q5SW96 308 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 DNM1P34Q6PK57 102 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 VITQ6UXI7 678 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 PRR23BQ6ZRT6 265 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 AASSQ9UDR5 926 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 A0A0G2JPF8 293 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 HNRNPCL3B7ZW38 293 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 HNRNPCL4P0DMR1 293 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 PRKCHP24723 683 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 HSPA7P48741 367 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 INAVAQ3KP66 663 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CREG2Q8IUH2 290 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 COPS5Q92905 334 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ZFP3Q96NJ6 502 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ERVK-18Q9QC07 812 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 KHKP50053 298 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 CACNG1Q06432 222 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 PTF1AQ7RTS3 328 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF554Q86TJ5 538 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 IFT27Q9BW83 186 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 FAM105AQ9NUU6 356 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 POLR1AO95602 1720 aaPredicted RBP5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ACSL1P33121 698 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 SHMT1P34896 483 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 REP15Q6BDI9 236 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC35G5Q96KT7 338 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 ABCG2Q9UNQ0 655 aa5.71□□□□□ -1.5
SRGAP1-201ENST00000355086 AZGP1P25311 298 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 NCBP2P52298 156 aaKnown RBP eCLIP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SELENOVP59797 346 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 C1QTNF8P60827 252 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CMC1Q7Z7K0 106 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 UBE2J2Q8N2K1 259 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF676Q8N7Q3 588 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 NETO2Q8NC67 525 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 GORASP1Q9BQQ3 440 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SLC28A3Q9HAS3 691 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TVP23BQ9NYZ1 205 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TIMM8BQ9Y5J9 83 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TCRBV9S1A1TA0A576 114 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ELOA3DA6NLF2 546 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ELOA3BQ3SY89 546 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 DEFB132Q7Z7B7 95 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ZNF101Q8IZC7 436 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ELOA3Q8NG57 546 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CPNE2Q96FN4 548 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TESMINQ9Y4I5 508 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ALPPP05187 535 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 GRHL2Q6ISB3 625 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 BEND4Q6ZU67 534 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 GPC2Q8N158 579 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TRIM43Q96BQ3 446 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TBL1XR1Q9BZK7 514 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ALG2Q9H553 416 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 MRPS30Q9NP92 439 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ARHGEF5Q12774 1597 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 GNB5O14775 395 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TRMUO75648 421 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 IL33O95760 270 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SIM2Q14190 667 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TMEM44Q2T9K0 475 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 FAM76BQ5HYJ3 339 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 IL23RQ5VWK5 629 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ARMC5Q96C12 935 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 MKKSQ9NPJ1 570 aaPredicted RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PRR5-ARHGAP8B1AHC4 643 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 CLEC3AO75596 197 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 POU2F1P14859 743 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 MAN2A2P49641 1150 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 AIF1P55008 147 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ARHGAP8P85298 464 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 INTS5Q6P9B9 1019 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PTCH2Q9Y6C5 1203 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 hCG_1818297A0A087WSY0 165 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 C2orf71A6NGG8 1288 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PNLIPRP1P54315 467 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 OR4K17Q8NGC6 315 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 GRPEL2Q8TAA5 225 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TNFRSF10BO14763 440 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ITGA5P08648 1049 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ARPC4P59998 168 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 ABHD13Q7L211 337 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 TOP6BLQ8N6T0 577 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 PIWIL1Q96J94 861 aaKnown RBP5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 BRF2Q9HAW0 419 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 BRD7Q9NPI1 651 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 B3GAT2Q9NPZ5 323 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 SAMD9LQ8IVG5 1584 aa5.7□□□□□ -1.5
SRGAP1-201ENST00000355086 E9PAM4 449 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms