RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 SLC5A10A0PJK1 596 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 MAP7D1Q3KQU3 841 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 SLC9B1Q4ZJI4 515 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 NEK5Q6P3R8 708 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 EPGNQ6UW88 154 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 ZNF547Q8IVP9 402 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 ZNF483Q8TF39 744 aaPredicted RBP20.12■□□□□ 0.81
TRIM4-202ENST00000354241 ASB11Q8WXH4 323 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 MYOCQ99972 504 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 TRIM54Q9BYV2 358 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 NUF2Q9BZD4 464 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 MID1IP1Q9NPA3 183 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 WWOXQ9NZC7 414 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 PDE10AQ9Y233 779 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 APOBEC2Q9Y235 224 aaKnown RBP20.12■□□□□ 0.81
TRIM4-202ENST00000354241 PRKAB1Q9Y478 270 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 KRBA1A5PL33 1030 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 PABPN1LA6NDY0 278 aaKnown RBP20.12■□□□□ 0.81
TRIM4-202ENST00000354241 ANKRD65E5RJM6 399 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 PPP6CO00743 305 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 SLC31A1O15431 190 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 TEAD1P28347 426 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 ACSL1P33121 698 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 RPIAP49247 311 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 NAA20P61599 178 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 ZP2Q05996 745 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 ABRQ12979 859 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 RBBP7Q16576 425 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 SULT1C3Q6IMI6 304 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 MBOAT1Q6ZNC8 495 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 CFAP206Q8IYR0 622 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 ZNF687Q8N1G0 1237 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 GBP7Q8N8V2 638 aaPredicted RBP20.12■□□□□ 0.81
TRIM4-202ENST00000354241 CFAP61Q8NHU2 1237 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 SLC12A9Q9BXP2 914 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 BTBD1Q9H0C5 482 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 PHPT1Q9NRX4 125 aaPredicted RBP20.12■□□□□ 0.81
TRIM4-202ENST00000354241 PTBP2Q9UKA9 531 aaKnown RBP20.12■□□□□ 0.81
TRIM4-202ENST00000354241 GPR34Q9UPC5 381 aa20.12■□□□□ 0.81
TRIM4-202ENST00000354241 MRPS17Q9Y2R5 130 aaKnown RBP20.12■□□□□ 0.81
TRIM4-202ENST00000354241 TNPO3Q9Y5L0 923 aaKnown RBP20.12■□□□□ 0.81
TRIM4-202ENST00000354241 TAPBPO15533 448 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 POP7O75817 140 aaKnown RBP20.11■□□□□ 0.81
TRIM4-202ENST00000354241 ENO2P09104 434 aaPredicted RBP20.11■□□□□ 0.81
TRIM4-202ENST00000354241 CYP2A7P20853 494 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 IGFALSP35858 605 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 HSPA7P48741 367 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 DGKEP52429 567 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 SH3BP2P78314 561 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 LCP2Q13094 533 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 SP140Q13342 867 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 PCBP2Q15366 365 aaKnown RBP eCLIP20.11■□□□□ 0.81
TRIM4-202ENST00000354241 SPRED3Q2MJR0 410 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 LINC00615Q96LM1 132 aaPredicted RBP20.11■□□□□ 0.81
TRIM4-202ENST00000354241 HGH1Q9BTY7 390 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 PARVBQ9HBI1 364 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 ARL15Q9NXU5 204 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 TRAF6Q9Y4K3 522 aa20.11■□□□□ 0.81
TRIM4-202ENST00000354241 PCYT1BQ9Y5K3 369 aaPredicted RBP20.11■□□□□ 0.81
TRIM4-202ENST00000354241 ZFC3H1O60293 1989 aaKnown RBP20.11■□□□□ 0.81
TRIM4-202ENST00000354241 E2F3O00716 465 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 FCHO1O14526 889 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 SLC16A5O15375 505 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 SKAP2O75563 359 aaPredicted RBP20.1■□□□□ 0.81
TRIM4-202ENST00000354241 ANXA5P08758 320 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 HIST1H2AGP0C0S8 130 aaPredicted RBP20.1■□□□□ 0.81
TRIM4-202ENST00000354241 HIST1H2ADP20671 130 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 PDHA2P29803 388 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 TRIM23P36406 574 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 TUBB3Q13509 450 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 HABP4Q5JVS0 413 aaKnown RBP20.1■□□□□ 0.81
TRIM4-202ENST00000354241 CLEC6AQ6EIG7 209 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 SYT13Q7L8C5 426 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 SYNPOQ8N3V7 929 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 MAFAQ8NHW3 353 aaPredicted RBP20.1■□□□□ 0.81
TRIM4-202ENST00000354241 RHBDF1Q96CC6 855 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 PRR11Q96HE9 360 aaPredicted RBP20.1■□□□□ 0.81
TRIM4-202ENST00000354241 FAR2Q96K12 515 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 HIST1H2AHQ96KK5 128 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 HIST1H2AJQ99878 128 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 H2AFJQ9BTM1 129 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 ZBTB26Q9HCK0 441 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 LTB4R2Q9NPC1 389 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 GULP1Q9UBP9 304 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 GOLGA8QA0A0J9YX86 632 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 GOLGA8OA6NCC3 632 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 CHURC1-FNTBB4DL54 471 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 GOLGA8NF8WBI6 632 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 H3BM21 787 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 GFYI3L273 518 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 LIN7AO14910 233 aaPredicted RBP20.1■□□□□ 0.81
TRIM4-202ENST00000354241 JUNP05412 331 aaKnown RBP20.1■□□□□ 0.81
TRIM4-202ENST00000354241 GSTM1P09488 218 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 GSTM4Q03013 218 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 GALNTL6Q49A17 601 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 ZNF658BQ4V348 819 aaPredicted RBP20.1■□□□□ 0.81
TRIM4-202ENST00000354241 FAM219BQ5XKK7 198 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 CLNKQ7Z7G1 428 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 LRRTM4Q86VH4 590 aa20.1■□□□□ 0.81
TRIM4-202ENST00000354241 SLC22A15Q8IZD6 547 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms